RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 HSDL1Q3SXM5 330 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PYHIN1Q6K0P9 492 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PLET1Q6UQ28 207 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 TMEM74Q96NL1 305 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 GPR22Q99680 433 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 ELOVL4Q9GZR5 314 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 CDCP1Q9H5V8 836 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 A0A0G2JMZ2 1700 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 LACTBL1A8MY62 500 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 UBXN8O00124 270 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 DLX3O60479 287 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MRPS14O60783 128 aaKnown RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MITFO75030 526 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 WDR47O94967 919 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MYL3P08590 195 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 ATP4BP51164 291 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 GBX1Q14549 363 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 TIGD6Q17RP2 521 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 COL28A1Q2UY09 1125 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PAN2Q504Q3 1202 aaKnown RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PDZK1Q5T2W1 519 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MANEALQ5VSG8 457 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 BSPRYQ5W0U4 402 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 SAXO2Q658L1 398 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 RPS27LQ71UM5 84 aaKnown RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 OVCH2Q7RTZ1 564 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PIWIL4Q7Z3Z4 852 aaKnown RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PTRH1Q86Y79 214 aaKnown RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 STX12Q86Y82 276 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 LAX1Q8IWV1 398 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 TBC1D19Q8N5T2 526 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 CHST13Q8NET6 341 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 OR11H4Q8NGC9 324 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MYDGFQ969H8 173 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 ELP4Q96EB1 424 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 CCDC126Q96EE4 140 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 ARL5BQ96KC2 179 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 FAM167AQ96KS9 214 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MRGPRX2Q96LB1 330 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 FCRL3Q96P31 734 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 OSBPL2Q9H1P3 480 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 C8orf33Q9H7E9 229 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 STARD7Q9NQZ5 370 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 RCOR3Q9P2K3 495 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 MLXQ9UH92 298 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 C17orf113A0A1B0GUU1 675 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 BBIP1A8MTZ0 92 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 PLA2G10O15496 165 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 MSCO60682 206 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 PEX10O60683 326 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 PDE9AO76083 593 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 POP4O95707 220 aaKnown RBP11.52□□□□□ -0.56
SHMT2-201ENST00000328923 CHRM5P08912 532 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-201ENST00000328923 SAT1P21673 171 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 GPX3P22352 226 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 PPP3CCP48454 512 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 HK3P52790 923 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 CSTF1Q05048 431 aaKnown RBP11.52□□□□□ -0.56
SHMT2-201ENST00000328923 GPR17Q13304 367 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 CAPSQ13938 189 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 SIM2Q14190 667 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-201ENST00000328923 HES5Q5TA89 166 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 NCBP2-AS2Q69YL0 99 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 LCLAT1Q6UWP7 414 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 RASSF6Q6ZTQ3 369 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 GALNT5Q7Z7M9 940 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 ZZZ3Q8IYH5 903 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 SRFBP1Q8NEF9 429 aaKnown RBP11.52□□□□□ -0.56
SHMT2-201ENST00000328923 OR6S1Q8NH40 331 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF669Q96BR6 464 aaPredicted RBP11.52□□□□□ -0.56
SHMT2-201ENST00000328923 CSPG4P5Q96PW8 444 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 OMDQ99983 421 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 NUSAP1Q9BXS6 441 aaKnown RBP11.52□□□□□ -0.56
SHMT2-201ENST00000328923 DYRK4Q9NR20 520 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 DNAJC11Q9NVH1 559 aa11.52□□□□□ -0.56
SHMT2-201ENST00000328923 ZCWPW2A0A1B0GU75 182 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 SIGLEC6O43699 453 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 RHOBTB1O94844 696 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 HTR3BO95264 441 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 ACAA1P09110 424 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 CSF3P09919 207 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 ALDOCP09972 364 aaKnown RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF37AP17032 561 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 ICAM3P32942 547 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 POU3F4P49335 361 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 DNAJB13P59910 316 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 OSTNP61366 133 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 EEF1A2Q05639 463 aaKnown RBP11.52□□□□□ -0.57
SHMT2-201ENST00000328923 SWI5Q1ZZU3 235 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 EEF1A1P5Q5VTE0 462 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 TMPRSS11AQ6ZMR5 421 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 FAM92BQ6ZTR7 304 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 CCDC149Q6ZUS6 474 aa11.52□□□□□ -0.57
SHMT2-201ENST00000328923 SLC46A3Q7Z3Q1 461 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms