RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CPAMD8Q8IZJ3 1885 aa6.36□□□□□ -1.39
CSTF3-201ENST00000323959 FAM157AC9JC47 383 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 FAM47E-STBD1D6RA91 191 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 HRGP04196 525 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 AMD1P17707 334 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ADRA1AP35348 466 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ETFBP38117 255 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ARL4DP49703 201 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 GYS2P54840 703 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CDH4P55283 916 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 GEMIN4P57678 1058 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 IL10RBQ08334 325 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TNK1Q13470 666 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ACOX1Q15067 660 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 FBXL19-AS1Q494R0 122 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 PPP6R3Q5H9R7 873 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SPANXN3Q5MJ09 141 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 FNBP1LQ5T0N5 605 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ANKRD22Q5VYY1 191 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ERAP2Q6P179 960 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 MARK2Q7KZI7 788 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 C11orf96Q7Z7L8 435 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF567Q8N184 647 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 VWA5B2Q8N398 1253 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 NPWQ8N729 165 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 PLA2G15Q8NCC3 412 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CLIP3Q96DZ5 547 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 EBNA1BP2Q99848 306 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 MAGEH1Q9H213 219 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CXorf56Q9H5V9 222 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ETNK1Q9HBU6 452 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 B4GALT7Q9UBV7 327 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 PCLOQ9Y6V0 5065 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 VPS13CQ709C8 3753 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 POLR3GO15318 223 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 EPOP01588 193 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 EBLN1P0CF75 366 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ETS1P14921 441 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TYRP1P17643 537 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 PGAM1P18669 254 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 XPAP23025 273 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SERPINB9P50453 376 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 MRPS25P82663 173 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 NME3Q13232 169 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 MPP3Q13368 585 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 OLIG2Q13516 323 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 WIPI1Q5MNZ9 446 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF385CQ66K41 422 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 PNCKQ6P2M8 343 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SHISA2Q6UWI4 295 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 LRRC31Q6UY01 552 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 LEKR1Q6ZMV7 388 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ARHGEF18Q6ZSZ5 1173 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SH2D5Q6ZV89 423 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CNTN4Q8IWV2 1026 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 GPATCH11Q8N954 259 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SLC44A1Q8WWI5 657 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TMEM125Q96AQ2 219 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 THOC3Q96J01 351 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SEC16BQ96JE7 1060 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 KLHL32Q96NJ5 620 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CYTH2Q99418 400 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CCL19Q99731 98 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TRIM31Q9BZY9 425 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 NOL6Q9H6R4 1146 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ACTR5Q9H9F9 607 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 PLAC1Q9HBJ0 212 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 NSMCE4AQ9NXX6 385 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 PSMC3IPQ9P2W1 217 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 COQ6Q9Y2Z9 468 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TTLL3Q9Y4R7 772 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 AKAP6Q13023 2319 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 USF3Q68DE3 2245 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 A0A0A6YYJ9 748 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ARHGAP42A6NI28 874 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SLCO1B7G3V0H7 640 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 LDB2O43679 373 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SNAP91O60641 907 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ANXA9O76027 345 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 KLHL18O94889 574 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SHBGP04278 402 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 RHOCP08134 193 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 ZSCAN5DPP0CG00 497 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 VSIG8P0DPA2 414 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 MDH1P40925 334 aaKnown RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 MAGEA12P43365 314 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CSNK1DP48730 415 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 NUP107P57740 925 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 DYNLT1P63172 113 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 HSD11B2P80365 405 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SLC18A2Q05940 514 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 NIPAL4Q0D2K0 466 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 FAM69BQ5VUD6 431 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TMEM26Q6ZUK4 368 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 TRABD2AQ86V40 505 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SLC26A11Q86WA9 606 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 CCDC71Q8IV32 467 aaPredicted RBP6.35□□□□□ -1.39
CSTF3-201ENST00000323959 LMNTD2Q8IXW0 634 aa6.35□□□□□ -1.39
CSTF3-201ENST00000323959 SLC38A9Q8NBW4 561 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms