RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GRXCR2A6NFK2 248 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 RFXANKO14593 260 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 OTCP00480 354 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 IL6P05231 212 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 CHRM5P08912 532 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 BCKDHAP12694 445 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 TNFSF8P32971 234 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SOX6P35712 828 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 PIK3CBP42338 1070 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 RGRP47804 291 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 RGS6P49758 472 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SNRPD2P62316 118 aaKnown RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ACVR1Q04771 509 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MXD1Q05195 221 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ST3GAL4Q11206 333 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 KRR1Q13601 381 aaKnown RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 STARD3Q14849 445 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 BAK1Q16611 211 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 TSTQ16762 297 aaKnown RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 XKR4Q5GH76 650 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 PRAMEF19Q5SWL8 479 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ERAP2Q6P179 960 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 UMODL1-AS1Q8N2C9 162 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 TMEM132CQ8N3T6 1108 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 IPCEF1Q8WWN9 437 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 CEP295NLQ96MC4 621 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 OR2A14Q96R47 310 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 CSNK1G1Q9HCP0 422 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 TM9SF3Q9HD45 589 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SAMD4AQ9UPU9 718 aaKnown RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 PNMA8CA0A1B0GUJ8 204 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 EVPLLA8MZ36 301 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 FAM220BPB1ANY3 271 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 FFAR2O15552 330 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 KLK8O60259 260 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CTSHP09668 335 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 NAT1P18440 290 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 POLR2EP19388 210 aaKnown RBP9.38□□□□□ -0.91
PTPRA-202ENST00000318266 UGT2B10P36537 528 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 KRT6CP48668 564 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 TBX4P57082 545 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 PTCHD3Q3KNS1 767 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CYP27C1Q4G0S4 372 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 WDR45BQ5MNZ6 344 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 OR4F3Q6IEY1 312 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 AFTPHQ6ULP2 937 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 GPR151Q8TDV0 419 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CNPPD1Q9BV87 410 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 C1QTNF3Q9BXJ4 246 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CLMPQ9H6B4 373 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 ELOVL2Q9NXB9 296 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 TOR4AQ9NXH8 423 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 WWOXQ9NZC7 414 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 MKLN1Q9UL63 735 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 OGDHLQ9ULD0 1010 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 LOC730098B7Z3J9 87 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CPSF4O95639 269 aaKnown RBP9.38□□□□□ -0.91
PTPRA-202ENST00000318266 ENDOUP21128 410 aaKnown RBP9.38□□□□□ -0.91
PTPRA-202ENST00000318266 IFNA8P32881 189 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 RFX2P48378 723 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CHRNEQ04844 493 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-202ENST00000318266 MFSD10Q14728 455 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 ATG9BQ674R7 924 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 PAMR1Q6UXH9 720 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF621Q6ZSS3 439 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 TMEM86AQ8N2M4 240 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CLDN19Q8N6F1 224 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 COQ7Q99807 217 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 SERHLQ9NQF3 203 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 TMEM184CQ9NVA4 438 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 AFF4Q9UHB7 1163 aaKnown RBP9.38□□□□□ -0.91
PTPRA-202ENST00000318266 PSORS1C1Q9UIG5 152 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 CCL27Q9Y4X3 112 aa9.38□□□□□ -0.91
PTPRA-202ENST00000318266 PCM1Q15154 2024 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 HAS3O00219 553 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 IFRD1O00458 451 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-202ENST00000318266 SH3BGRLO75368 114 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 OPN1SWP03999 348 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 RHOQP17081 205 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 RRM2P31350 389 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF140P52738 457 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-202ENST00000318266 P2RX3P56373 397 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 GPR50Q13585 617 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 USP39Q53GS9 565 aaKnown RBP9.37□□□□□ -0.91
PTPRA-202ENST00000318266 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 SYCE2Q6PIF2 218 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 SPATA2LQ8IUW3 424 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-202ENST00000318266 SLC44A2Q8IWA5 706 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-202ENST00000318266 LAX1Q8IWV1 398 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 RNF175Q8N4F7 328 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 DNAJC22Q8N4W6 341 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 GLB1L3Q8NCI6 653 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-202ENST00000318266 OR7D4Q8NG98 312 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 MYDGFQ969H8 173 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 FEVQ99581 238 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 EBPLQ9BY08 206 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 RLIMQ9NVW2 624 aa9.37□□□□□ -0.91
PTPRA-202ENST00000318266 SPASTQ9UBP0 616 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms