RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 IDH3AP50213 366 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 FOXA1P55317 472 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 ABATP80404 500 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 HHEXQ03014 270 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 BTKQ06187 659 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 LAPTM5Q13571 262 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 SUZ12Q15022 739 aaKnown RBP13.59□□□□□ -0.23
MSRA-201ENST00000317173 PDCD2Q16342 344 aaPredicted RBP13.59□□□□□ -0.23
MSRA-201ENST00000317173 PAGE2BQ5JRK9 111 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 ATG9BQ674R7 924 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 GRHL2Q6ISB3 625 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 SUSD1Q6UWL2 747 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 C17orf64Q86WR6 236 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 NAXDQ8IW45 347 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 LINC01555Q8NAE3 123 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 NEIL2Q969S2 332 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 C19orf60Q96EN9 201 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 PTCD3Q96EY7 689 aaKnown RBP13.59□□□□□ -0.23
MSRA-201ENST00000317173 CDK15Q96Q40 435 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.59□□□□□ -0.23
MSRA-201ENST00000317173 SNX6Q9UNH7 406 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 FIS1Q9Y3D6 152 aa13.59□□□□□ -0.23
MSRA-201ENST00000317173 KCNE1BA0A087WTH5 132 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 A0A1W2PPV9 198 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 E7EQ34 232 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 FLRT2O43155 660 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.24
MSRA-201ENST00000317173 FKBP9O95302 570 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 C1GALT1C1LP0DN25 315 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 EPHA8P29322 1005 aaPredicted RBP13.58□□□□□ -0.24
MSRA-201ENST00000317173 TSTA3Q13630 321 aaPredicted RBP13.58□□□□□ -0.24
MSRA-201ENST00000317173 GPR18Q14330 331 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 KIR2DS3Q14952 304 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 PLCL1Q15111 1095 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 INAVAQ3KP66 663 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 XKR6Q5GH73 641 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.58□□□□□ -0.24
MSRA-201ENST00000317173 SLCO4C1Q6ZQN7 724 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 TMEM26Q6ZUK4 368 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 ACTRT2Q8TDY3 377 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 CCT6BQ92526 530 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 USP7Q93009 1102 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 RILPQ96NA2 401 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 KCNA7Q96RP8 456 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 EBF4Q9BQW3 602 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 PITHD1Q9GZP4 211 aaPredicted RBP13.58□□□□□ -0.24
MSRA-201ENST00000317173 SRMSQ9H3Y6 488 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 PELI2Q9HAT8 420 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 IL21RQ9HBE5 538 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 TCF7L2Q9NQB0 619 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 MRGBPQ9NV56 204 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 TAC3Q9UHF0 121 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 TRIM33Q9UPN9 1127 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 RNF11Q9Y3C5 154 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 TIMM22Q9Y584 194 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 PCDHGA11Q9Y5H2 935 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 ENTPD2Q9Y5L3 495 aa13.58□□□□□ -0.24
MSRA-201ENST00000317173 TRBV23OR9-2A0A075B6M9 112 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 SERTM1A2A2V5 107 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 H0YIV9 168 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 EBAG9O00559 213 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 SDHDO14521 159 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 PRICKLE3O43900 615 aaPredicted RBP13.57□□□□□ -0.24
MSRA-201ENST00000317173 PCDHGA12O60330 932 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 NOBOXO60393 691 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 CCDC22O60826 627 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 ULK1O75385 1050 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 HRH2P25021 359 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 CXCR2P25025 360 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 PRDX1Q06830 199 aaKnown RBP13.57□□□□□ -0.24
MSRA-201ENST00000317173 SF3A3Q12874 501 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSRA-201ENST00000317173 DOC2AQ14183 400 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 SHBQ15464 509 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 SLC9B1Q4ZJI4 515 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 ICE2Q659A1 982 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 NXPE4Q6UWF7 544 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 TMPRSS11BQ86T26 416 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 MYLK4Q86YV6 388 aaPredicted RBP13.57□□□□□ -0.24
MSRA-201ENST00000317173 ARL14Q8N4G2 192 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 DCBLD1Q8N8Z6 715 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 GPR156Q8NFN8 814 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 ABHD11Q8NFV4 315 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 OR2A1Q8NGT9 310 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 CEP70Q8NHQ1 597 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 PATE1Q8WXA2 126 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 UBE2E3Q969T4 207 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 REPS1Q96D71 796 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 XKR8Q9H6D3 395 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 CAAP1Q9H8G2 361 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 RIC8BQ9NVN3 520 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 TSC22D4Q9Y3Q8 395 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 HEATR5BQ9P2D3 2071 aa13.57□□□□□ -0.24
MSRA-201ENST00000317173 PRAMEF33A0A0G2JMD5 474 aa13.56□□□□□ -0.24
MSRA-201ENST00000317173 LILRA5A6NI73 299 aa13.56□□□□□ -0.24
MSRA-201ENST00000317173 SLC28A1O00337 649 aa13.56□□□□□ -0.24
MSRA-201ENST00000317173 PIP5K1BO14986 540 aa13.56□□□□□ -0.24
MSRA-201ENST00000317173 SH3BP5O60239 455 aa13.56□□□□□ -0.24
MSRA-201ENST00000317173 PRAMEF4O60810 478 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms