RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RGS18Q9NS28 235 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 ABCC13Q9NSE7 274 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TREX1Q9NSU2 369 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TJP2Q9UDY2 1190 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 OGDHLQ9ULD0 1010 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 CLEC4AQ9UMR7 237 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 NEU3Q9UQ49 428 aa6.48□□□□□ -1.37
ZNF540-201ENST00000316433 NYNRINQ9P2P1 1898 aaKnown RBP6.48□□□□□ -1.37
ZNF540-201ENST00000316433 TRPM7Q96QT4 1865 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 NPIPB8E9PQR5 432 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 FZD9O00144 591 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 DDX39AO00148 427 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 GABRDO14764 452 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 DSCR3O14972 297 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 AKAP8O43823 692 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 BRINP1O60477 761 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 OAZ2O95190 189 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ALDH1A1P00352 501 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ITGB1P05556 798 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ACAA1P09110 424 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ZNF806P0C7X5 589 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 THRBP10828 461 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 PRF1P14222 555 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CD36P16671 472 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TAL1P17542 331 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TNFSF9P41273 254 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 MAP2K4P45985 399 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 PGDP52209 483 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 PSMD4P55036 377 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TMEM132DQ14C87 1099 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 MICAQ29983 383 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TTC23Q5W5X9 447 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 SLC16A13Q7RTY0 426 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 SPPL2CQ8IUH8 684 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ZZZ3Q8IYH5 903 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 DCP1BQ8IZD4 617 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CLEC4FQ8N1N0 589 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 DPP10Q8N608 796 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 C2CD4AQ8NCU7 369 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 NSMAFQ92636 917 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CCDC115Q96NT0 180 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 FCRL5Q96RD9 977 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 DPYSL5Q9BPU6 564 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ACTR6Q9GZN1 396 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TMEM39BQ9GZU3 492 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 SLC52A3Q9NQ40 469 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 NIT2Q9NQR4 276 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CUEDC1Q9NWM3 386 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 SDHAF2Q9NX18 166 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 THUMPD1Q9NXG2 353 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CACNA2D2Q9NY47 1150 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TSPAN16Q9UKR8 245 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 KAT6AQ92794 2004 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 A0A0G2JLL6 359 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 A0A0G2JPF8 293 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CXorf51AA0A1B0GTR3 108 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 A0A1W2PP18 115 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TMEM150BA6NC51 233 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 HNRNPCL3B7ZW38 293 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 M0QYV0 167 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TERTO14746 1132 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 KLK8O60259 260 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 POP7O75817 140 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 EIF3GO75821 320 aaKnown RBP eCLIP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CNMDO75829 334 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 SRP72O76094 671 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 F9P00740 461 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 LDLRP01130 860 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 S100A9P06702 114 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 KLK3P07288 261 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 LTA4HP09960 611 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 HNRNPCL4P0DMR1 293 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 OGNP20774 298 aaKnown RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CPN2P22792 545 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ATP5OP48047 213 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CLCN5P51795 746 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CD47Q08722 323 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 HYAL2Q12891 473 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 FGL2Q14314 439 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TRAM2Q15035 370 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 NCF4Q15080 339 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 BAK1Q16611 211 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 SLC10A6Q3KNW5 377 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 TRIM60Q495X7 471 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 PABPC1L2AQ5JQF8 200 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 GLRA4Q5JXX5 417 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 OTUD3Q5T2D3 398 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 KDM4DQ6B0I6 523 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 REP15Q6BDI9 236 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 LAIR2Q6ISS4 152 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ERICH5Q6P6B1 374 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 PRRT2Q7Z6L0 340 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 DMRTC2Q8IXT2 367 aaPredicted RBP6.47□□□□□ -1.37
ZNF540-201ENST00000316433 KBTBD8Q8NFY9 601 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ASB15Q8WXK1 588 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 KLRG1Q96E93 195 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 C10orf90Q96M02 699 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 SLC30A2Q9BRI3 323 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 PTDSS2Q9BVG9 487 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms