RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 TAGLN3Q9UI15 199 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 CYTH4Q9UIA0 394 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TUBE1Q9UJT0 475 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 TCFL5Q9UL49 500 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 ACSL5Q9ULC5 683 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 SRPK3Q9UPE1 567 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NUDCQ9Y266 331 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 NCOA3Q9Y6Q9 1424 aa1.2□□□□□ -2.22
CEP290-201ENST00000309041 LOC102724428A0A0B4J2F2 783 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 VWA3AA6NCI4 1184 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ARHGAP42A6NI28 874 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TMEM150CB9EJG8 249 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TCP10L2B9ZVM9 353 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 DCLK1O15075 740 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 BANF1O75531 89 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RAD17O75943 681 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TDP2O95551 362 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 LY86O95711 162 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 CPNE6O95741 557 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 FAM107AO95990 144 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ANXA2P07355 339 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 UBA1P22314 1058 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 WARSP23381 471 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 ELAVL4P26378 380 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 TLX1P31314 330 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 GDNFP39905 211 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 DHPSP49366 369 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 SIK1P57059 783 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TMPRSS3P57727 454 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 LSM3P62310 102 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 SSRP1Q08945 709 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 MTX1Q13505 466 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RIN1Q13671 783 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 EXOSC2Q13868 293 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 ZNHIT3Q15649 155 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 HLFQ16534 295 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ZACNQ401N2 412 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 KRBOX4Q5JUW0 171 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 CTSL3PQ5NE16 218 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TBCELQ5QJ74 424 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 SNX30Q5VWJ9 437 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 GTF2IRD2BQ6EKJ0 949 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RBPMS2Q6ZRY4 209 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 DSG4Q86SJ6 1040 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 MOB3BQ86TA1 216 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 PLXDC1Q8IUK5 500 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ARMC8Q8IUR7 673 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ZSCAN1Q8NBB4 408 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 LRRC15Q8TF66 581 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ESR2Q92731 530 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 PGAP3Q96FM1 320 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 ABCC11Q96J66 1382 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 FAR2Q96K12 515 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 PPP1R36Q96LQ0 422 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 C8orf49Q96NF6 230 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 YIPF4Q9BSR8 244 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.19□□□□□ -2.22
CEP290-201ENST00000309041 DDA1Q9BW61 102 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TTLL2Q9BWV7 592 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TMEM120AQ9BXJ8 343 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 STK33Q9BYT3 514 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TRIM15Q9C019 465 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ZC3H12CQ9C0D7 883 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 MAGT1Q9H0U3 335 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 CATSPERBQ9H7T0 1116 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ARMCX3Q9UH62 379 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 PRSS50Q9UI38 385 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 SIK3Q9Y2K2 1263 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 PRSS21Q9Y6M0 314 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ACEP12821 1306 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 A0A0B4J2A0 478 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 SLC12A8A0AV02 714 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 MED19A0JLT2 244 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 PRAMEF27A3QJZ7 478 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RFPL4AA6NLU0 287 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 KCNJ18B7U540 433 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 E7ESA3 106 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RFPL4AL1F8VTS6 287 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 CTDSP2O14595 271 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ERLIN1O75477 346 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RFPL2O75678 378 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ZFPL1O95159 310 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 NDUFB2O95178 105 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RASAL1O95294 804 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 S1PR4O95977 384 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ADRB3P13945 408 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 SERPINB5P36952 375 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 HTR6P50406 440 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 BTN3A2P78410 334 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 IRF9Q00978 393 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 DCTN2Q13561 401 aaKnown RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 SLBPQ14493 270 aaKnown RBP eCLIP1.19□□□□□ -2.22
CEP290-201ENST00000309041 LETM2Q2VYF4 491 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 ELFN2Q5R3F8 820 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 TTC38Q5R3I4 469 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 HIBCHQ6NVY1 386 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 CRTC3Q6UUV7 619 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 VSTM1Q6UX27 236 aa1.19□□□□□ -2.22
CEP290-201ENST00000309041 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.19□□□□□ -2.22
CEP290-201ENST00000309041 SSX6Q7RTT6 188 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms