RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RALGPS2Q86X27 583 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 MFSD4AQ8N468 514 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR56A4Q8NGH8 313 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR2T11Q8NH01 316 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 MARVELD3Q96A59 401 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 EID2BQ96D98 161 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ASIC4Q96FT7 647 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 B3GNT4Q9C0J1 378 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 SLA2Q9H6Q3 261 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 CATSPERZQ9NTU4 200 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF225Q9UK10 706 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 PCTPQ9UKL6 214 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 DGKBQ9Y6T7 804 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ANTXRLA6NF34 631 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 OTOL1A6NHN0 477 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 POLR1CO15160 346 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 TSPAN9O75954 239 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 HOXB6P17509 224 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ACVR2AP27037 513 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 HOXA9P31269 272 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 CLK3P49761 638 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 STC1P52823 247 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ISL1P61371 349 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 TAGLNQ01995 201 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 RAD51Q06609 339 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 KRR1Q13601 381 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 DGUOKQ16854 277 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 IMPG1Q17R60 797 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 POM121L1PQ3SYA9 428 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZC3H12BQ5HYM0 836 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 LDLRAP1Q5SW96 308 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 MPP7Q5T2T1 576 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF691Q5VV52 312 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 PIWIL3Q7Z3Z3 882 aaKnown RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 BTLAQ7Z6A9 289 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 SLCO6A1Q86UG4 719 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZSWIM9Q86XI8 627 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR4L1Q8NH43 312 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 SLC28A3Q9HAS3 691 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 FKBPLQ9UIM3 349 aa10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 MAGED1Q9Y5V3 778 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3F-201ENST00000308521 LOC100130705A0A1B0GUX0 176 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 UBA6A0AVT1 1052 aaPredicted RBP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SNTNA6NMZ2 147 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FAM25AB3EWG3 89 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FAM25CB3EWG5 89 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FAM25GB3EWG6 89 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SLC1A7O00341 560 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SLC16A6O15403 523 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 RRM2P31350 389 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 GRK3P35626 688 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SOX11P35716 441 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SERPINB10P48595 397 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 DUSP7Q16829 419 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SETMARQ53H47 684 aaPredicted RBP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 CEP78Q5JTW2 689 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 Q6ZVU0 165 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 PIANPQ8IYJ0 282 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SLC38A6Q8IZM9 456 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 NKAPQ8N5F7 415 aaKnown RBP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 NATD1Q8N6N6 113 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 PHF10Q8WUB8 498 aaKnown RBP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 POP5Q969H6 163 aaKnown RBP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 LMLNQ96KR4 655 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF583Q96ND8 569 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ADGRE3Q9BY15 652 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 DGCR6LQ9BY27 220 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 PIF1Q9H611 641 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ATP13A3Q9H7F0 1226 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SMURF2Q9HAU4 748 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ANKHQ9HCJ1 492 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZDHHC4Q9NPG8 344 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 TAS2R13Q9NYV9 303 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 UGT2A1Q9Y4X1 527 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ST14Q9Y5Y6 855 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 MAN1A2O60476 641 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 RHOBTB1O94844 696 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 INMTO95050 263 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 DDX6P26196 483 aaKnown RBP eCLIP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 PRDX3P30048 256 aaKnown RBP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 BCL2L1Q07817 233 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 KCNAB2Q13303 367 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 RFX4Q33E94 735 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 INAVAQ3KP66 663 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ATP6AP1LQ52LC2 224 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FAM78AQ5JUQ0 283 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ARMC12Q5T9G4 340 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 PAQR3Q6TCH7 311 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 DPY19L3Q6ZPD9 716 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 GPRIN3Q6ZVF9 776 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 C12orf40Q86WS4 652 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FNDC5Q8NAU1 212 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 CHST14Q8NCH0 376 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR7A2PQ8NGA2 310 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR6Q1Q8NGQ2 317 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR5K1Q8NHB7 308 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZFP90Q8TF47 636 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FAR1Q8WVX9 515 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FGF13Q92913 245 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 FUBP1Q96AE4 644 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms