RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 FBXO48Q5FWF7 155 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 MROH9Q5TGP6 573 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 ZNF385CQ66K41 422 aaPredicted RBP17.45■□□□□ 0.38
SPSB3-201ENST00000301717 ZNF425Q6IV72 752 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 RNF44Q7L0R7 432 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 IFT20Q8IY31 132 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 METTL27Q8N6F8 245 aaPredicted RBP17.45■□□□□ 0.38
SPSB3-201ENST00000301717 EXTL1Q92935 676 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 HIST1H2AHQ96KK5 128 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 PRAP1Q96NZ9 151 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 HIST1H2AJQ99878 128 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 H2AFJQ9BTM1 129 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 FAM129AQ9BZQ8 928 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 POPDC3Q9HBV1 291 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 KLK4Q9Y5K2 254 aa17.45■□□□□ 0.38
SPSB3-201ENST00000301717 NCF1BA6NI72 391 aaPredicted RBP17.44■□□□□ 0.38
SPSB3-201ENST00000301717 NCF1CA8MVU1 366 aaPredicted RBP17.44■□□□□ 0.38
SPSB3-201ENST00000301717 CAPN1P07384 714 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 NCF1P14598 390 aaPredicted RBP17.44■□□□□ 0.38
SPSB3-201ENST00000301717 RAB10P61026 200 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 SNRPNP63162 240 aaKnown RBP17.44■□□□□ 0.38
SPSB3-201ENST00000301717 IRF9Q00978 393 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 CSHL1Q14406 222 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 OR4D1Q15615 310 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 WASHC2DQ5SRD0 308 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 FAM198BQ6UWH4 519 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.44■□□□□ 0.38
SPSB3-201ENST00000301717 PTERQ96BW5 349 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 TSPAN17Q96FV3 270 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 OR4K3Q96R72 315 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 CYTH2Q99418 400 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 ACTL8Q9H568 366 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 ACSS3Q9H6R3 686 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 CTNNAL1Q9UBT7 734 aa17.44■□□□□ 0.38
SPSB3-201ENST00000301717 ANKRD12Q6UB98 2062 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 H0YGG7 62 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 FKBP9O95302 570 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 KLK3P07288 261 aaPredicted RBP17.43■□□□□ 0.38
SPSB3-201ENST00000301717 SLC35E2BP0CK96 405 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 CD1DP15813 335 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ITGAXP20702 1163 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ALAS2P22557 587 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 PHBP35232 272 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 GCGRP47871 477 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ARF3P61204 181 aaPredicted RBP17.43■□□□□ 0.38
SPSB3-201ENST00000301717 NAB1Q13506 487 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ERV3-1Q14264 604 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ZC3H12BQ5HYM0 836 aaKnown RBP17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ZNF517Q6ZMY9 492 aaPredicted RBP17.43■□□□□ 0.38
SPSB3-201ENST00000301717 TTLL10Q6ZVT0 673 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 RAPH1Q70E73 1250 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ZSCAN1Q8NBB4 408 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 TTC9Q92623 222 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 FBXL8Q96CD0 374 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 LRFN5Q96NI6 719 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ZNF285Q96NJ3 590 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 GBP5Q96PP8 586 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 ZFYVE21Q9BQ24 234 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 NDC1Q9BTX1 674 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 SGPP1Q9BX95 441 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 DERL2Q9GZP9 239 aa17.43■□□□□ 0.38
SPSB3-201ENST00000301717 FEZF1A0PJY2 475 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 PABPN1LA6NDY0 278 aaKnown RBP17.42■□□□□ 0.38
SPSB3-201ENST00000301717 ZNF891A8MT65 544 aaPredicted RBP17.42■□□□□ 0.38
SPSB3-201ENST00000301717 CCNDBP1O95273 360 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 ENO2P09104 434 aaPredicted RBP17.42■□□□□ 0.38
SPSB3-201ENST00000301717 CDH1P12830 882 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 NPPBP16860 134 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 AP1S2P56377 157 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 MEF2AQ02078 507 aaPredicted RBP17.42■□□□□ 0.38
SPSB3-201ENST00000301717 HKDC1Q2TB90 917 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 RHBDD2Q6NTF9 364 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 ENDOVQ8N8Q3 282 aaKnown RBP17.42■□□□□ 0.38
SPSB3-201ENST00000301717 OR56A3Q8NH54 315 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 EXT2Q93063 718 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 UBXN10Q96LJ8 280 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 TSNARE1Q96NA8 513 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 EGFL8Q99944 293 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 MACROD1Q9BQ69 325 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 TRIM54Q9BYV2 358 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 SLC22A11Q9NSA0 550 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 NDOR1Q9UHB4 597 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 OARD1Q9Y530 152 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 AP1M2Q9Y6Q5 423 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 SEC16AO15027 2179 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 FER1L5A0AVI2 2057 aa17.42■□□□□ 0.38
SPSB3-201ENST00000301717 POC1B-GALNT4F8VUJ3 575 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 P2RX6O15547 441 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 CNOT3O75175 753 aaKnown RBP17.41■□□□□ 0.38
SPSB3-201ENST00000301717 GDF5P43026 501 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 KCNC1P48547 511 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 CSNK1G2P78368 415 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 ABATP80404 500 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 CDC20Q12834 499 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 IL10RAQ13651 578 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 LY6DQ14210 128 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 TBR1Q16650 682 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 SOWAHCQ53LP3 525 aaPredicted RBP17.41■□□□□ 0.38
SPSB3-201ENST00000301717 CATSPEREQ5SY80 951 aa17.41■□□□□ 0.38
SPSB3-201ENST00000301717 MLIPQ5VWP3 458 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms