RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 BCKDHAP12694 445 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 ATP1B2P14415 290 aaPredicted RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 HRH2P25021 359 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 SLC7A9P82251 487 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 TXNL4AP83876 142 aaKnown RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 PCBP2Q15366 365 aaKnown RBP eCLIP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 CDKN3Q16667 212 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 OR4F3Q6IEY1 312 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 SULT1C3Q6IMI6 304 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 NIPAL1Q6NVV3 410 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 HID1Q8IV36 788 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 GLMNQ92990 594 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 ITCHQ96J02 903 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 TOX2Q96NM4 488 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 EMILIN2Q9BXX0 1053 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 LRRC3Q9BY71 257 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 RAD21L1Q9H4I0 556 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 DUS2Q9NX74 493 aaKnown RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 ADGRE2Q9UHX3 823 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 SARDHQ9UL12 918 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 H0Y858 1186 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 KPNA4O00629 521 aaPredicted RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 AQP9O43315 295 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 SOCS5O75159 536 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 EEDO75530 441 aaKnown RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 KRT6AP02538 564 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 FGBP02675 491 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 KRT6BP04259 564 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 CEBPBP17676 345 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 IDUAP35475 653 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 KRT6CP48668 564 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 EMX2Q04743 252 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 PRMT9Q6P2P2 845 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 ZNF621Q6ZSS3 439 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 C12orf40Q86WS4 652 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 SYTL1Q8IYJ3 562 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 LSM14AQ8ND56 463 aaKnown RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 OR7G1Q8NGA0 311 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 TANKQ92844 425 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 PPP3R2Q96LZ3 170 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 LRRC3BQ96PB8 259 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 SMURF2Q9HAU4 748 aa9.81□□□□□ -0.84
FOXN4-201ENST00000299162 DDX28Q9NUL7 540 aaKnown RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 IFT80Q9P2H3 777 aaPredicted RBP9.81□□□□□ -0.84
FOXN4-201ENST00000299162 FADS2P1A8MWK0 482 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 MYO1GB0I1T2 1018 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 K7ESM1 405 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ARHGEF15O94989 841 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 CTSLP07711 333 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 POLR2IP36954 125 aaKnown RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 CLK3P49761 638 aaKnown RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 PRMT2P55345 433 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 RPL26P61254 145 aaKnown RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 TUBA1BP68363 451 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 GTF2H3Q13889 308 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ARHGAP15Q53QZ3 475 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 IER5LQ5T953 404 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 SPESP1Q6UW49 350 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ABRAXAS1Q6UWZ7 409 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 TUBA1AQ71U36 451 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 CYP2U1Q7Z449 544 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ADIPOR2Q86V24 386 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ZCCHC7Q8N3Z6 543 aaKnown RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 PDPRQ8NCN5 879 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 OR7A2PQ8NGA2 310 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 TMEM159Q96B96 161 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 AP2M1Q96CW1 435 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 DPH2Q9BQC3 489 aaPredicted RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 IGFLR1Q9H665 355 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 SLC52A3Q9NQ40 469 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 PRDM8Q9NQV8 689 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 GPRC5BQ9NZH0 403 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ZMAT5Q9UDW3 170 aaKnown RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 PLAGL1Q9UM63 463 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 NOTCH4Q99466 2003 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ALBP02768 609 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 S100A3P33764 101 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 CDKN2CP42773 168 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 MAPK8P45983 427 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 SLC6A11P48066 632 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ZNF284Q2VY69 593 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 NHSL2Q5HYW2 709 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 TMEM236Q5W0B7 351 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 TMEM220Q6QAJ8 160 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 DLEU7Q6UYE1 221 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 TRMT11Q7Z4G4 463 aaKnown RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 CFAP206Q8IYR0 622 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 C7orf57Q8NEG2 295 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 TRPV3Q8NET8 790 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 SUN5Q8TC36 379 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 MCOLN3Q8TDD5 553 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ITPKCQ96DU7 683 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 CARS2Q9HA77 564 aaKnown RBP9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ABCD2Q9UBJ2 740 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 AASSQ9UDR5 926 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 ERVW-1Q9UQF0 538 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 M0R3G1 203 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 PRAMEF4O60810 478 aa9.8□□□□□ -0.84
FOXN4-201ENST00000299162 PRKD3O94806 890 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms