RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 HIST1H2AHQ96KK5 128 aa23.66■■□□□ 1.38
SPTSSA-201ENST00000298130 FAM210AQ96ND0 272 aa23.66■■□□□ 1.38
SPTSSA-201ENST00000298130 HIST1H2AJQ99878 128 aa23.66■■□□□ 1.38
SPTSSA-201ENST00000298130 H2AFJQ9BTM1 129 aa23.66■■□□□ 1.38
SPTSSA-201ENST00000298130 ZDHHC6Q9H6R6 413 aa23.66■■□□□ 1.38
SPTSSA-201ENST00000298130 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.66■■□□□ 1.38
SPTSSA-201ENST00000298130 MAN2B2Q9Y2E5 1009 aa23.66■■□□□ 1.38
SPTSSA-201ENST00000298130 CCNDBP1O95273 360 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 UGT2B4P06133 528 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 LAMP1P11279 417 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 COX7A2P14406 83 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 CD22P20273 847 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 SLC35A2P78381 396 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 GSTM4Q03013 218 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 CLCA4Q14CN2 919 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 GPR153Q6NV75 609 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 RDH14Q9HBH5 336 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 OR2AG2A6NM03 316 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 SOBPA7XYQ1 873 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 CKMP06732 381 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 CCDC159P0C7I6 412 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 CREMQ03060 361 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 SREBF2Q12772 1141 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 SLC29A3Q9BZD2 475 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 ELAC1Q9H777 363 aaKnown RBP23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 ZDHHC3Q9NYG2 299 aa23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 SAMD4AQ9UPU9 718 aaKnown RBP23.65■■□□□ 1.38
SPTSSA-201ENST00000298130 TMEM202A6NGA9 273 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 OPN1SWP03999 348 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 FABP3P05413 133 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 BMP4P12644 408 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 KDELR2P33947 212 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 KRT20P35900 424 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 MVKQ03426 396 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 INAQ16352 499 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 VMACQ2NL98 169 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 FRG2Q64ET8 278 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 ADCK1Q86TW2 530 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 PTOV1Q86YD1 416 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 ZZZ3Q8IYH5 903 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 CMTM8Q8IZV2 173 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 FRG2BQ96QU4 278 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 RETREG1Q9H6L5 497 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 KRT84Q9NSB2 600 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 SACM1LQ9NTJ5 587 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 ASIC5Q9NY37 505 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 NAALAD2Q9Y3Q0 740 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 MYOFQ9NZM1 2061 aa23.64■■□□□ 1.38
SPTSSA-201ENST00000298130 ARHGDIAP52565 204 aa23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 KDM4DQ6B0I6 523 aa23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 ANGPTL8Q6UXH0 198 aa23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 P2RY8Q86VZ1 359 aa23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 LILRA3Q8N6C8 439 aaPredicted RBP23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 OVCA2Q8WZ82 227 aa23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 KCNC2Q96PR1 638 aa23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 KIAA1522Q9P206 1035 aaPredicted RBP23.64■■□□□ 1.37
SPTSSA-201ENST00000298130 ACPPP15309 386 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 SERPINA4P29622 427 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 MAGEA2P43356 314 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 ABRQ12979 859 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 CCSMST1Q4G0I0 132 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 CATSPEREQ5SY80 951 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 GPR156Q8NFN8 814 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 OR52E4Q8NGH9 312 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 NELL1Q92832 810 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 VOPP1Q96AW1 172 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 EPS8L2Q9H6S3 715 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 CFAP97Q9P2B7 532 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 GABARAPO95166 117 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 IGSF6O95976 241 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 PRPS2P11908 318 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 WNT3P56703 355 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 ZNF846Q147U1 533 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 VEPH1Q14D04 833 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 POM121L1PQ3SYA9 428 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 NIPAL1Q6NVV3 410 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 OR52J3Q8NH60 311 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 MED8Q96G25 268 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 HERC2P3Q9BVR0 1158 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 AKIP1Q9NQ31 210 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 TMEM184CQ9NVA4 438 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 THUMPD1Q9NXG2 353 aaKnown RBP23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 SLCO3A1Q9UIG8 710 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 MAGEB17A8MXT2 336 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 PCDHGA12O60330 932 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 GBAP04062 536 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 ITGAMP11215 1152 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 C21orf33P30042 268 aaPredicted RBP23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 CARTPTQ16568 116 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 GPR33Q49SQ1 333 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 DSG4Q86SJ6 1040 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 OR2AP1Q8NGE2 309 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 CMTM7Q96FZ5 175 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 IGSF21Q96ID5 467 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 ABCB8Q9NUT2 735 aa23.63■■□□□ 1.37
SPTSSA-201ENST00000298130 M0R129 80 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 PQBP1O60828 265 aaKnown RBP23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 EPN2O95208 641 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 ETHE1O95571 254 aa23.62■■□□□ 1.37
SPTSSA-201ENST00000298130 RPP38P78345 283 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms