RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CRB2Q5IJ48 1285 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 SYVN1Q86TM6 617 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 HID1Q8IV36 788 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 TM9SF2Q99805 663 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 FAM83DQ9H4H8 585 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 LOC100130705A0A1B0GUX0 176 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 CD2P06729 351 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 RHOQP17081 205 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 XRCC1P18887 633 aaPredicted RBP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 MAP2K5Q13163 448 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 TAF1AQ15573 450 aaPredicted RBP15.76■□□□□ 0.11
SSRP1-202ENST00000293880 ABHD15Q6UXT9 468 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 LRRC52Q8N7C0 313 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 NXPE2Q96DL1 559 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 ABCB8Q9NUT2 735 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 GSKIPQ9P0R6 139 aa15.76■□□□□ 0.11
SSRP1-202ENST00000293880 MYOCOSA0A1B0GUC4 107 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 FKTNO75072 461 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 CHRM1P11229 460 aaPredicted RBP15.75■□□□□ 0.11
SSRP1-202ENST00000293880 NFATC2Q13469 925 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 SLC15A3Q8IY34 581 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF676Q8N7Q3 588 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 THEM6Q8WUY1 208 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 MKL1Q969V6 931 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 CNDP2Q96KP4 475 aaKnown RBP15.75■□□□□ 0.11
SSRP1-202ENST00000293880 HIST1H2AAQ96QV6 131 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 DCSTAMPQ9H295 470 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 TBC1D14Q9P2M4 693 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 RIPK3Q9Y572 518 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 NIPSNAP2O75323 286 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 PRAMEF12O95522 483 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 MRPL3P09001 348 aaKnown RBP15.75■□□□□ 0.11
SSRP1-202ENST00000293880 CYP3A5P20815 502 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 HNRNPH3P31942 346 aaKnown RBP15.75■□□□□ 0.11
SSRP1-202ENST00000293880 PDX1P52945 283 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 ARFRP1Q13795 201 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 LRRC37A5PQ49AS3 106 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 HSDL2Q6YN16 418 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 LGI4Q8N135 537 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 TMEM74Q96NL1 305 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 KCNA7Q96RP8 456 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 POLR2J3Q9H1A7 115 aaKnown RBP15.75■□□□□ 0.11
SSRP1-202ENST00000293880 SLC2A6Q9UGQ3 507 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 FAM234BA2RU67 622 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 MUSKO15146 869 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 RPS3P23396 243 aaKnown RBP eCLIP15.75■□□□□ 0.111e-6■■■□□ 17.1
SSRP1-202ENST00000293880 UFM1P61960 85 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 DSG2Q14126 1118 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 C1orf94Q6P1W5 598 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 NUP54Q7Z3B4 507 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 PIGWQ7Z7B1 504 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 CEP97Q8IW35 865 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 NLGN2Q8NFZ4 835 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 AUTS2Q8WXX7 1259 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 TIFAQ96CG3 184 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 LRRC58Q96CX6 371 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF347Q96SE7 839 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 FTHL17Q9BXU8 183 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 SMURF1Q9HCE7 757 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 TUBG2Q9NRH3 451 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 CNTN6Q9UQ52 1028 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 A0A1W2PRQ8 180 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 BOLA2-SMG1P6H3BVE0 249 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 CLDN4O14493 209 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 XPNPEP2O43895 674 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 RLN2P04090 185 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 ASPAP45381 313 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 CANT1Q8WVQ1 401 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 SYT17Q9BSW7 474 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 WDR6Q9NNW5 1121 aaKnown RBP15.75■□□□□ 0.11
SSRP1-202ENST00000293880 A0A1B0GV50 99 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 KERAO60938 352 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 DCAF12L1Q5VU92 463 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 C1orf216Q8TAB5 229 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 SCAMP5Q8TAC9 235 aa15.75■□□□□ 0.11
SSRP1-202ENST00000293880 ROBO3Q96MS0 1386 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 WASH3PC4AMC7 463 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 NDUFS4O43181 175 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF45Q02386 682 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 SHQ1Q6PI26 577 aaKnown RBP15.74■□□□□ 0.11
SSRP1-202ENST00000293880 AQP11Q8NBQ7 271 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 IL1RAPQ9NPH3 570 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF282Q9UDV7 671 aaPredicted RBP15.74■□□□□ 0.11
SSRP1-202ENST00000293880 IQGAP1P46940 1657 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 A0A1W2PRB8 838 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 ECI2O75521 394 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 GGT5P36269 586 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 VMACQ2NL98 169 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 HMGN2P46Q86SG4 172 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF611Q8N823 705 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 SLC25A51Q9H1U9 297 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 RPL36Q9Y3U8 105 aaKnown RBP15.74■□□□□ 0.11
SSRP1-202ENST00000293880 HERVK_113P63132 956 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 PRKD1Q15139 912 aaPredicted RBP15.74■□□□□ 0.11
SSRP1-202ENST00000293880 KRBOX4Q5JUW0 171 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 VITQ6UXI7 678 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 ZNF101Q8IZC7 436 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 OR8K3Q8NH51 312 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 SLC22A8Q8TCC7 542 aa15.74■□□□□ 0.11
SSRP1-202ENST00000293880 CYB5D2Q8WUJ1 264 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms