RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OPTCQ9UBM4 332 aa16.3■□□□□ 0.2
CPSF4-201ENST00000292476 TSR3Q9UJK0 312 aaKnown RBP16.3■□□□□ 0.2
CPSF4-201ENST00000292476 ZFR2Q9UPR6 939 aaKnown RBP16.3■□□□□ 0.2
CPSF4-201ENST00000292476 ANGPTL3Q9Y5C1 460 aa16.3■□□□□ 0.2
CPSF4-201ENST00000292476 PIKFYVEQ9Y2I7 2098 aa16.3■□□□□ 0.2
CPSF4-201ENST00000292476 TCRBV21S2A2A0A5A6 115 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 MGAT4DA6NG13 374 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 H3BM21 787 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 SOCS2O14508 198 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 OR6B1O95007 311 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 BMP10O95393 424 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 ATP6V1B1P15313 513 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 GGT5P36269 586 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 ERVPABLB-1P60509 514 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 UFM1P61960 85 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 FAM219BQ5XKK7 198 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 AP1ARQ63HQ0 302 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 LRRTM4Q86VH4 590 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 HID1Q8IV36 788 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 FNDC5Q8NAU1 212 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 TP53I13Q8NBR0 393 aaPredicted RBP16.29■□□□□ 0.2
CPSF4-201ENST00000292476 PLA2G15Q8NCC3 412 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 DENND6BQ8NEG7 585 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 BTBD1Q9H0C5 482 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 OLAHQ9NV23 265 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 MBD1Q9UIS9 605 aaPredicted RBP16.29■□□□□ 0.2
CPSF4-201ENST00000292476 MAGEL2Q9UJ55 1249 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 ANAPC2Q9UJX6 822 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 AURKCQ9UQB9 309 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 PDE10AQ9Y233 779 aa16.29■□□□□ 0.2
CPSF4-201ENST00000292476 TRIM64A6NGJ6 449 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 K7EPI3 171 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 KMOO15229 486 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 KCNJ13O60928 360 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 LILRB5O75023 590 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PSIP1O75475 530 aaKnown RBP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 STK16O75716 305 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 POP7O75817 140 aaKnown RBP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 WDR47O94967 919 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 MYCLP1P12525 358 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PCSK2P16519 638 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 ZNF8P17098 575 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 NDUFV2P19404 249 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 JAK1P23458 1154 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 MAD2L1Q13257 205 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 FZD5Q13467 585 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 IRF4Q15306 451 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PHKG1Q16816 387 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PAGE3Q5JUK9 113 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 LETMD1Q6P1Q0 360 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 Q6ZSR9 355 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 FKBP9P1Q75LS8 142 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 SYT13Q7L8C5 426 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 GOLGA7Q7Z5G4 137 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 TRIM69Q86WT6 500 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 EPHX4Q8IUS5 362 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 KIAA2013Q8IYS2 634 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 ZNF687Q8N1G0 1237 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 CDYL2Q8N8U2 506 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 DTWD2Q8NBA8 298 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PRSS33Q8NF86 280 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PROKR1Q8TCW9 393 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 TEX37Q96LM6 180 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 MAGEB10Q96LZ2 347 aaPredicted RBP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PPP3R2Q96LZ3 170 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 OSBPL6Q9BZF3 934 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 LMAN1LQ9HAT1 526 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 ITM2CQ9NQX7 267 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 GMPR2Q9P2T1 348 aaKnown RBP16.28■□□□□ 0.2
CPSF4-201ENST00000292476 EGFL7Q9UHF1 273 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 AP3M1Q9Y2T2 418 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 PCDHB3Q9Y5E6 796 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 LRRK1Q38SD2 2015 aa16.28■□□□□ 0.2
CPSF4-201ENST00000292476 HOXC4P09017 264 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-201ENST00000292476 CHRNB1P11230 501 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 EPB42P16452 691 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 CKMT2P17540 419 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 GTF2H2Q13888 395 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 CYP51A1Q16850 503 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 NANOGP8Q6NSW7 305 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 GTF2H2CQ6P1K8 395 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 TMEM92Q6UXU6 159 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 LRRC70Q7Z2Q7 622 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 TRIM74Q86UV6 250 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 AMZ2Q86W34 360 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 RASGRP3Q8IV61 690 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 CFAP206Q8IYR0 622 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 CBR4Q8N4T8 237 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 FBXO15Q8NCQ5 510 aaPredicted RBP16.27■□□□□ 0.2
CPSF4-201ENST00000292476 ZFP28Q8NHY6 868 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 METTL6Q8TCB7 284 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 VPS33AQ96AX1 596 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 CCDC138Q96M89 665 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 NANOGQ9H9S0 305 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 ASIC5Q9NY37 505 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 ZNF639Q9UID6 485 aa16.27■□□□□ 0.2
CPSF4-201ENST00000292476 CACNB4O00305 520 aaPredicted RBP16.27■□□□□ 0.19
CPSF4-201ENST00000292476 OR7A17O14581 309 aa16.27■□□□□ 0.19
CPSF4-201ENST00000292476 TOR1BO14657 336 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms