RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZNF28P17035 718 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 SLC6A12P48065 614 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 PTCHD3Q3KNS1 767 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 KLC3Q6P597 504 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 N4BP2L2Q92802 583 aaPredicted RBP25.81■■□□□ 1.72
SSU72-201ENST00000291386 PYCR2Q96C36 320 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 ZNF285Q96NJ3 590 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 OR4K3Q96R72 315 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 ULBP3Q9BZM4 244 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 ABCF3Q9NUQ8 709 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 NUDT4Q9NZJ9 180 aa25.81■■□□□ 1.72
SSU72-201ENST00000291386 RRP8O43159 456 aaKnown RBP25.8■■□□□ 1.72
SSU72-201ENST00000291386 SRPX2O60687 465 aaPredicted RBP25.8■■□□□ 1.72
SSU72-201ENST00000291386 SCRG1O75711 98 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 KIAA0754O94854 1291 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 SPTBP11277 2137 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 CLN3Q13286 438 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 TSNAXIP1Q2TAA8 658 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 DEFB110Q30KQ9 67 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 FBXO42Q6P3S6 717 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 C17orf64Q86WR6 236 aa25.8■■□□□ 1.72
SSU72-201ENST00000291386 MCATQ8IVS2 390 aaKnown RBP25.8■■□□□ 1.72
SSU72-201ENST00000291386 PLD6Q8N2A8 252 aaKnown RBP25.8■■□□□ 1.72
SSU72-201ENST00000291386 CUEDC1Q9NWM3 386 aaPredicted RBP25.8■■□□□ 1.72
SSU72-201ENST00000291386 PTBP2Q9UKA9 531 aaKnown RBP25.8■■□□□ 1.72
SSU72-201ENST00000291386 NCF1BA6NI72 391 aaPredicted RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 SYCE1LA8MT33 242 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 NCF1CA8MVU1 366 aaPredicted RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 E7EQ34 232 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 TAPBPO15533 448 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 IPO13O94829 963 aaKnown RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 MT-ND3P03897 115 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 NCF1P14598 390 aaPredicted RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 TIPARPQ7Z3E1 657 aaKnown RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 LCA5Q86VQ0 697 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 THOC6Q86W42 341 aaKnown RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 TMEM126BQ8IUX1 230 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 GPR135Q8IZ08 494 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 NLGN4XQ8N0W4 816 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 NLGN4YQ8NFZ3 816 aaPredicted RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 ACMSDQ8TDX5 336 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 NKD1Q969G9 470 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 ALKBH8Q96BT7 664 aaKnown RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 LRFN5Q96NI6 719 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 ZFYVE21Q9BQ24 234 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 TMEM79Q9BSE2 394 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 CNOT10Q9H9A5 744 aaKnown RBP25.79■■□□□ 1.72
SSU72-201ENST00000291386 CD274Q9NZQ7 290 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 AP1M2Q9Y6Q5 423 aa25.79■■□□□ 1.72
SSU72-201ENST00000291386 NRP2O60462 931 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 RAD1O60671 282 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 CPNE3O75131 537 aaKnown RBP25.78■■□□□ 1.72
SSU72-201ENST00000291386 CDH16O75309 829 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 OR2B3O76000 313 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 S100BP04271 92 aaPredicted RBP25.78■■□□□ 1.72
SSU72-201ENST00000291386 RBP1P09455 135 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 MTHFD2P13995 350 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 EZRP15311 586 aaKnown RBP25.78■■□□□ 1.72
SSU72-201ENST00000291386 TECRLQ5HYJ1 363 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 TCTE1Q5JU00 501 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 TLDC1Q6P9B6 456 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 LRRC69Q6ZNQ3 347 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 ABHD11Q8NFV4 315 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 TBK1Q9UHD2 729 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 SH2B3Q9UQQ2 575 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 SLC22A14Q9Y267 594 aa25.78■■□□□ 1.72
SSU72-201ENST00000291386 MDC1Q14676 2089 aaKnown RBP25.77■■□□□ 1.72
SSU72-201ENST00000291386 SRRM3A6NNA2 597 aaPredicted RBP25.77■■□□□ 1.72
SSU72-201ENST00000291386 H7BY64 318 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 KLK8O60259 260 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 GCGRP47871 477 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 GLRBP48167 497 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 ST3GAL2Q16842 350 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 C6orf15Q6UXA7 325 aaPredicted RBP25.77■■□□□ 1.72
SSU72-201ENST00000291386 ESX1Q8N693 406 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 OR4K1Q8NGD4 311 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 EPS8L3Q8TE67 593 aaKnown RBP25.77■■□□□ 1.72
SSU72-201ENST00000291386 PRAP1Q96NZ9 151 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 SPRTNQ9H040 489 aaPredicted RBP25.77■■□□□ 1.72
SSU72-201ENST00000291386 ZNF358Q9NW07 568 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 WWOXQ9NZC7 414 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 KCNE2Q9Y6J6 123 aa25.77■■□□□ 1.72
SSU72-201ENST00000291386 ANKRD11Q6UB99 2663 aaPredicted RBP25.76■■□□□ 1.71
SSU72-201ENST00000291386 A0A0J9YVX5 310 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 FITM1A5D6W6 292 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 MAP2K7O14733 419 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 CTSBP07858 339 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 HBQ1P09105 142 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 ATP1A2P50993 1020 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 CSNK1G2P78368 415 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 TGIF1Q15583 401 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 C18orf21Q32NC0 220 aaPredicted RBP25.76■■□□□ 1.71
SSU72-201ENST00000291386 SPACA3Q8IXA5 215 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 RIBC1Q8N443 379 aaPredicted RBP25.76■■□□□ 1.71
SSU72-201ENST00000291386 UBTD2Q8WUN7 234 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 SLC5A11Q8WWX8 675 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 TSNARE1Q96NA8 513 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 OR2A5Q96R48 311 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 SELENOSQ9BQE4 189 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 SARGQ9BW04 601 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms