RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 SNX6Q9UNH7 406 aa9.46□□□□□ -0.89
PPP4R1-201ENST00000285124 UNC13CQ8NB66 2214 aa9.46□□□□□ -0.89
PPP4R1-201ENST00000285124 SEC16AO15027 2179 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 BTN3A3O00478 584 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 WFS1O76024 890 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 C9P02748 559 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 MTHFD1P11586 935 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 TACR1P25103 407 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 PLA2G16P53816 162 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 RACK1P63244 317 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 ART3Q13508 389 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 AMZ1Q400G9 498 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 GLIPR1L2Q4G1C9 344 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 C1orf210Q8IVY1 113 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 NAGSQ8N159 534 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 FBXL6Q8N531 539 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 TMEM105Q8N8V8 129 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 OR56A3Q8NH54 315 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 NTMT1Q9BV86 223 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 C1QTNF3Q9BXJ4 246 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 RMI1Q9H9A7 625 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 IL21RQ9HBE5 538 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 LRTM1Q9HBL6 345 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 GEMIN8Q9NWZ8 242 aaKnown RBP9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 CPNE7Q9UBL6 633 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 TMCO1Q9UM00 188 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 ICKQ9UPZ9 632 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 DMTF1Q9Y222 760 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 COLEC10Q9Y6Z7 277 aa9.46□□□□□ -0.9
PPP4R1-201ENST00000285124 CAPN14A8MX76 684 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 MYO1CO00159 1063 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 YY2O15391 372 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 HRO43593 1189 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 LCMT2O60294 686 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 RAB28P51157 221 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 CDKL1Q00532 357 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 TIGD2Q4W5G0 525 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 CCDC157Q569K6 752 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 UNC5DQ6UXZ4 953 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 AMIGO1Q86WK6 493 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 DEFB107AQ8IZN7 70 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 LIX1Q8N485 282 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 FAM156AQ8NDB6 213 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 ZDHHC1Q8WTX9 485 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 SMPDL3AQ92484 453 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 DPH7Q9BTV6 452 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 GSDMCQ9BYG8 508 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 STN1Q9H668 368 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 SYNDIG1Q9H7V2 258 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 DLGAP4Q9Y2H0 992 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 PLXNA2O75051 1894 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 CELSR3Q9NYQ7 3312 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 GNG14A0A1W2PPG7 69 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 TMEM221A6NGB7 291 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 M0R296 226 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 RGS14O43566 566 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 RSL1D1O76021 490 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 C1GALT1C1LP0DN25 315 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 AOC1P19801 751 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 CALB2P22676 271 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 HHEXQ03014 270 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 CAPRIN1Q14444 709 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 PGS1Q32NB8 556 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 C6orf10Q5SRN2 563 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 FBXW10Q5XX13 1052 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 IYDQ6PHW0 289 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 SLCO4C1Q6ZQN7 724 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 USP53Q70EK8 1073 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 ANKRD46Q86W74 232 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 IFNEQ86WN2 208 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 RAB42Q8N4Z0 105 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 Q8N9G6 341 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 CMTM5Q96DZ9 223 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 SIKE1Q9BRV8 207 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 HRASLS2Q9NWW9 162 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 TRNAU1APQ9NX07 287 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 DLGAP2Q9P1A6 1054 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 SNX11Q9Y5W9 270 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 SPTBN2O15020 2390 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 A0A0J9YVX5 310 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 ANKDD1BA6NHY2 528 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 GPR89AB7ZAQ6 455 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 LSM1O15116 133 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 GPR89BP0CG08 455 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 JUPP14923 745 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 AMD1P17707 334 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 MAGP20916 626 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 RPS9P46781 194 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 ACTN3Q08043 901 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 HIST2H2ACQ16777 129 aaPredicted RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 NKAIN2Q5VXU1 208 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 HIST2H2AA3Q6FI13 130 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 MED27Q6P2C8 311 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 NXPE4Q6UWF7 544 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 TMIGD1Q6UXZ0 262 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 MIER2Q8N344 545 aa9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 C1orf52Q8N6N3 182 aaKnown RBP9.45□□□□□ -0.9
PPP4R1-201ENST00000285124 HMGCLL1Q8TB92 370 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms