RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TUSC3Q13454 348 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 LRRC66Q68CR7 880 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 SNX29P2Q8IUI4 249 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF584Q8IVC4 421 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 FCAMRQ8WWV6 532 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 LDAHQ9H6V9 325 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 HSPB11Q9Y547 144 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 JCADQ9P266 1359 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 NOBOXO60393 691 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ESR1P03372 595 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CD72P21854 359 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 AGTR1P30556 359 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MAGEA8P43361 318 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MARCKSL1P49006 195 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 GBE1Q04446 702 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ANKDD1AQ495B1 522 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 UBXN11Q5T124 520 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ASB15Q8WXK1 588 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CENPMQ9NSP4 180 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 LAMP5Q9UJQ1 280 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ROBO3Q96MS0 1386 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CRHR2Q13324 411 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 GANABQ14697 944 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ARHGAP12Q8IWW6 846 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MAB21L3Q8N8X9 362 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 KCNC2Q96PR1 638 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 FAM124BQ9H5Z6 455 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 DERAQ9Y315 318 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CMAHPQ9Y471 501 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 COL1A2P08123 1366 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 TOR1BO14657 336 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 KCNJ13O60928 360 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 OAZ2O95190 189 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 RPL10P27635 214 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 MAGEA3P43357 314 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF81P51508 661 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 GARNL3Q5VVW2 1013 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 NIPAL1Q6NVV3 410 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 CHST9Q7L1S5 443 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 OTOP1Q7RTM1 612 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 LRRC52Q8N7C0 313 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 C7orf50Q9BRJ6 194 aaKnown RBP8.53□□□□□ -1.04
NIPBL-201ENST00000282516 ITM2CQ9NQX7 267 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
NIPBL-201ENST00000282516 DPPA5A6NC42 116 aa8.52□□□□□ -1.04
NIPBL-201ENST00000282516 PTGER3P43115 390 aa8.52□□□□□ -1.04
NIPBL-201ENST00000282516 CDH11P55287 796 aa8.52□□□□□ -1.04
NIPBL-201ENST00000282516 FSTL1Q12841 308 aa8.52□□□□□ -1.04
NIPBL-201ENST00000282516 METTL25Q8N6Q8 603 aa8.52□□□□□ -1.04
NIPBL-201ENST00000282516 DENND1AQ8TEH3 1009 aa8.52□□□□□ -1.04
NIPBL-201ENST00000282516 CIDECQ96AQ7 238 aaPredicted RBP8.52□□□□□ -1.04
NIPBL-201ENST00000282516 DGAT2Q96PD7 388 aa8.52□□□□□ -1.04
NIPBL-201ENST00000282516 WDR55Q9H6Y2 383 aaPredicted RBP8.52□□□□□ -1.04
NIPBL-201ENST00000282516 CIB4A0PJX0 185 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 DLGAP1O14490 977 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 FFAR2O15552 330 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 MSI1O43347 362 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 STBD1O95210 358 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 CDK2P24941 298 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 RTP1P59025 263 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 BDH1Q02338 343 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 NFE2L1Q14494 772 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 DHCR24Q15392 516 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM164Q5U3C3 297 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 VSTM1Q6UX27 236 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 UNQ6126/PRO20091Q6UXV3 157 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 C3P1Q6ZMU1 363 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 SLC22A18Q96BI1 424 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 FBXL3Q9UKT7 428 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 MAGI3Q5TCQ9 1506 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 SMAD9O15198 467 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 GRID2O43424 1007 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 SFTPBP07988 381 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 GNSP15586 552 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 CHMP24386 653 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 CCND3P30281 292 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 NSG1P42857 185 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 BEX3Q00994 111 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 PTGR1Q14914 329 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ACBD4Q8NC06 268 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 OR6K2Q8NGY2 324 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 RAD9AQ99638 391 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ACO2Q99798 780 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 WACQ9BTA9 647 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 EIF2B3Q9NR50 452 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ENAMQ9NRM1 1142 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 EIF2B4Q9UI10 523 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 IL33O95760 270 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 PSMA6P60900 246 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 LGI4Q8N135 537 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 FTMTQ8N4E7 242 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 OR52E4Q8NGH9 312 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 MTERF1Q99551 399 aaKnown RBP8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TBX5Q99593 518 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 SEC61A2Q9H9S3 476 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 GHRLQ9UBU3 117 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 TLL1O43897 1013 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 MT-CO2P00403 227 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 ADRB2P07550 413 aa8.52□□□□□ -1.05
NIPBL-201ENST00000282516 PIM1P11309 404 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms