RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 FAM72AQ5TYM5 149 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 SAXO2Q658L1 398 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 FAM72DQ6L9T8 149 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 CAPN13Q6MZZ7 669 aaPredicted RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 FAM72BQ86X60 149 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 VWA5B2Q8N398 1253 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 OR10A6Q8NH74 314 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 OR5M11Q96RB7 305 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 RTP3Q9BQQ7 232 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 TTPALQ9BTX7 342 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 EML4Q9HC35 981 aaKnown RBP8.54□□□□□ -1.04
VAPB-201ENST00000265619 SMURF1Q9HCE7 757 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 ZC4H2Q9NQZ6 224 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 KCTD5Q9NXV2 234 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 SCN3BQ9NY72 215 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 GPR83Q9NYM4 423 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 VAPAQ9P0L0 249 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 ABCG2Q9UNQ0 655 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 VPS9D1Q9Y2B5 631 aa8.54□□□□□ -1.04
VAPB-201ENST00000265619 USP34Q70CQ2 3546 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ZNF487B1APH4 448 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 E9PAM4 449 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 STSP08842 583 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ADORA2BP29275 332 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 SSTR2P30874 369 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 KCNK10P57789 538 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 CAP1Q01518 475 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 GPR19Q15760 415 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 MARCH8Q5T0T0 291 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 GPR158Q5T848 1215 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 FRMPD2BQ6IN97 320 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 C17orf99Q6UX52 265 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 GPAT4Q86UL3 456 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ENTHD1Q8IYW4 607 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 PHACTR4Q8IZ21 702 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 OR52K2Q8NGK3 314 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 WBP1Q96G27 269 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 HPDLQ96IR7 371 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 SPNS1Q9H2V7 528 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ASAH2Q9NR71 780 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 RNF186Q9NXI6 227 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 TRAPPC4Q9Y296 219 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ANK1P16157 1881 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 PLXNB2O15031 1838 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 MED7O43513 233 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 NDUFS6O75380 124 aaKnown RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 TULP3O75386 442 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 GPX5O75715 221 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 RECQL4O94761 1208 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ITGB1P05556 798 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 AKR1A1P14550 325 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 BMP8BP34820 402 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 RPL35P42766 123 aaKnown RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 NR2C2P49116 596 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 FOXM1Q08050 763 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ZNF273Q14593 569 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 GTDC1Q4AE62 458 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ARMCX4Q5H9R4 360 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 TRILQ7L0X0 811 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 TMPRSS9Q7Z410 1059 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 BMP8AQ7Z5Y6 402 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 C1orf127Q8N9H9 656 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 TRPV1Q8NER1 839 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ZNF675Q8TD23 568 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 UPRTQ96BW1 309 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 TMEM176AQ96HP8 235 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 COPS4Q9BT78 406 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 TMEM134Q9H6X4 195 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 DIABLOQ9NR28 239 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 CDH9Q9ULB4 789 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ACTL7AQ9Y615 435 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 FABP7O15540 132 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 CILPO75339 1184 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 SERPINI2O75830 405 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 MPC2O95563 127 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 MT-CYBP00156 380 aaPredicted RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 ZNF865P0CJ78 1059 aaPredicted RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 ITGAMP11215 1152 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 POU1F1P28069 291 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 CHRNA4P43681 627 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 POLR2JP52435 117 aaKnown RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 IL18R1Q13478 541 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 LARS2Q15031 903 aaKnown RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 ZPBP2Q6X784 338 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ACOT1Q86TX2 421 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 RYBPQ8N488 228 aaPredicted RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 OR5K1Q8NHB7 308 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 PROKR1Q8TCW9 393 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ZNF419Q96HQ0 510 aaPredicted RBP8.53□□□□□ -1.04
VAPB-201ENST00000265619 SENP8Q96LD8 212 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 UROC1Q96N76 676 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 KATNBL1Q9H079 304 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 SERHL2Q9H4I8 314 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 ASB7Q9H672 318 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 SLC6A13Q9NSD5 602 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 NSMCE4AQ9NXX6 385 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 CD274Q9NZQ7 290 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 MAGEL2Q9UJ55 1249 aa8.53□□□□□ -1.04
VAPB-201ENST00000265619 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms