RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 FAM98AQ8NCA5 519 aaKnown RBP16.27■□□□□ 0.2
PHRF1-201ENST00000264555 ZCCHC3Q9NUD5 404 aaKnown RBP16.27■□□□□ 0.2
PHRF1-201ENST00000264555 CHURC1-FNTBB4DL54 471 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 FESP07332 822 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 RHOP08100 348 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 SAGP10523 405 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-201ENST00000264555 ZBED5Q49AG3 693 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 KLHL17Q6TDP4 642 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 TRAM1L1Q8N609 369 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 GPR150Q8NGU9 434 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 ZCCHC10Q8TBK6 192 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 DNAJC15Q9Y5T4 150 aa16.27■□□□□ 0.2
PHRF1-201ENST00000264555 DRGXA6NNA5 263 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 CDH3P22223 829 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 CASP9P55211 416 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 TMIGD1Q6UXZ0 262 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 GPR135Q8IZ08 494 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 PTBP2Q9UKA9 531 aaKnown RBP16.27■□□□□ 0.19
PHRF1-201ENST00000264555 LRRC14BA6NHZ5 514 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 SCAMP1O15126 338 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 IL12AP29459 219 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 PREPP48147 710 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 GALK1P51570 392 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 C2orf27AQ580R0 203 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 C10orf62Q5T681 223 aaPredicted RBP16.27■□□□□ 0.19
PHRF1-201ENST00000264555 KANK2Q63ZY3 851 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 RANBP3LQ86VV4 465 aaPredicted RBP16.27■□□□□ 0.19
PHRF1-201ENST00000264555 PEX5LQ8IYB4 626 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 MINDY1Q8N5J2 469 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 FLCNQ8NFG4 579 aa16.27■□□□□ 0.19
PHRF1-201ENST00000264555 GEMIN6Q8WXD5 167 aaKnown RBP16.27■□□□□ 0.19
PHRF1-201ENST00000264555 CARS2Q9HA77 564 aaKnown RBP16.27■□□□□ 0.19
PHRF1-201ENST00000264555 DNAAF2Q9NVR5 837 aaKnown RBP16.27■□□□□ 0.19
PHRF1-201ENST00000264555 AKAP7Q9P0M2 348 aaPredicted RBP16.27■□□□□ 0.19
PHRF1-201ENST00000264555 AFF1P51825 1210 aaKnown RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 SCAMP4Q969E2 229 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 RAD9AQ99638 391 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 DPEP2Q9H4A9 486 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 KAT8Q9H7Z6 458 aaKnown RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 T-ENOLP0DO92 83 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 CSF2RAP15509 400 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 TIE1P35590 1138 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 RPS13P62277 151 aaKnown RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 FAM91A1Q658Y4 838 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 KLHDC10Q6PID8 442 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 NPAS3Q8IXF0 933 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 KDM1BQ8NB78 822 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 RFKQ969G6 155 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 BLOC1S3Q6QNY0 202 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 SLC45A3Q96JT2 553 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 TRMT61BQ9BVS5 477 aaKnown RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 TUBA8Q9NY65 449 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 CCDC182A6NF36 153 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 LOC110117498-PIK3R3F6TDL0 507 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 K7ERQ8 282 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 CASKO14936 926 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 EEDO75530 441 aaKnown RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 CSNK2A2P19784 350 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 ETV3P41162 512 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 SH3BP2P78314 561 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 ZFAND4Q86XD8 727 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 DCUN1D3Q8IWE4 304 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 ANKRD49Q8WVL7 239 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 KCNH6Q9H252 994 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 C11orf16Q9NQ32 467 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 DUXAA6NLW8 204 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 KMOO15229 486 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 HTRA2O43464 458 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 NR4A1P22736 598 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 TUBA4AP68366 448 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 GLYATL1Q969I3 302 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 AURKBQ96GD4 344 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 CCM2LQ9NUG4 571 aaPredicted RBP16.26■□□□□ 0.19
PHRF1-201ENST00000264555 ADAMTS6Q9UKP5 1117 aa16.26■□□□□ 0.19
PHRF1-201ENST00000264555 HAT1O14929 419 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 CHRM1P11229 460 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 FPR1P21462 350 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 ACTR1BP42025 376 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 ACTR1AP61163 376 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 DSC3Q14574 896 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 TMC8Q8IU68 726 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 FUBP1Q96AE4 644 aaKnown RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 RBM18Q96H35 190 aaKnown RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 EVA1BQ9NVM1 165 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 PRMT3O60678 531 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 HNRNPA1P09651 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 CST5P28325 142 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 HTR1EP28566 365 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 IL12RB1P42701 662 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 CDK6Q00534 326 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 TRIM71Q2Q1W2 868 aaKnown RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 COQ5Q5HYK3 327 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 SLC39A5Q6ZMH5 540 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 ERI1Q8IV48 349 aaKnown RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 APCDD1Q8J025 514 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 OR5AK3PQ8NH89 298 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 CAMK1GQ96NX5 476 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 KCNK13Q9HB14 408 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 P2RX2Q9UBL9 471 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms