RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PRMT2P55345 433 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 CD47Q08722 323 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 GTDC1Q4AE62 458 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 USP45Q70EL2 814 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 ZDHHC13Q8IUH4 622 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 RHOXF1Q8NHV9 184 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 FIG4Q92562 907 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 C1orf109Q9NX04 203 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 ARL15Q9NXU5 204 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.94■■□□□ 1.1
MCF2L-201ENST00000261963 MAFFQ9ULX9 164 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 A0A1W2PRU2 124 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 DYRK3O43781 588 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 CLDN9O95484 217 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 PCNAP12004 261 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 ALDH4A1P30038 563 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 PHC1P78364 1004 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 CPSF6Q16630 551 aaKnown RBP eCLIP21.94■■□□□ 1.1
MCF2L-201ENST00000261963 ENPP6Q6UWR7 440 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 ELMOD1Q8N336 334 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 DYNC2LI1Q8TCX1 351 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 THUMPD3Q9BV44 507 aaKnown RBP21.94■■□□□ 1.1
MCF2L-201ENST00000261963 NEK6Q9HC98 313 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 LTB4R2Q9NPC1 389 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 SLC6A13Q9NSD5 602 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 TBX21Q9UL17 535 aa21.94■■□□□ 1.1
MCF2L-201ENST00000261963 A6NL46 340 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 SLC1A7O00341 560 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 C1SP09871 688 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 VBP1P61758 197 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 FAM98BQ52LJ0 330 aaKnown RBP21.93■■□□□ 1.1
MCF2L-201ENST00000261963 LRRC73Q5JTD7 316 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 ASTLQ6HA08 431 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-201ENST00000261963 AADATQ8N5Z0 425 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 FAR1Q8WVX9 515 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 MBOAT4Q96T53 435 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 CEP44Q9C0F1 390 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 SLC32A1Q9H598 525 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 ACTR8Q9H981 624 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 DLGAP4Q9Y2H0 992 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 PLXNB3Q9ULL4 1909 aa21.93■■□□□ 1.1
MCF2L-201ENST00000261963 TRBV5-3A0A0A0MS03 114 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 TTC34A8MYJ7 566 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 G3V2T6 193 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 PDYNP01213 254 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 AOAHP28039 575 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 EMX1Q04741 257 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-201ENST00000261963 GBX1Q14549 363 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 RUNDC3AQ59EK9 446 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 DPY19L3Q6ZPD9 716 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 SLC46A2Q9BY10 475 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 ALOXE3Q9BYJ1 711 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 GPBP1L1Q9HC44 474 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-201ENST00000261963 ABCB10Q9NRK6 738 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 TRAV19A0A0A6YYK7 116 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 MAN1A2O60476 641 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 UPK1BO75841 260 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 MTHFRP42898 656 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 CHRNB3Q05901 458 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 CDKL4Q5MAI5 379 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 USP43Q70EL4 1123 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 UBE2R2Q712K3 238 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-201ENST00000261963 PAGE2Q7Z2X7 111 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 LYSMD2Q8IV50 215 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 VRK3Q8IV63 474 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 RORBQ92753 470 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 AMBRA1Q9C0C7 1298 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 ZDHHC6Q9H6R6 413 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 SMURF2Q9HAU4 748 aa21.92■■□□□ 1.1
MCF2L-201ENST00000261963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.92■■□□□ 1.1
MCF2L-201ENST00000261963 PAK1IP1Q9NWT1 392 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-201ENST00000261963 KCNE1BA0A087WTH5 132 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 TNFRSF10AO00220 468 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 POLR2EP19388 210 aaKnown RBP21.91■■□□□ 1.1
MCF2L-201ENST00000261963 EIF2DP41214 584 aaKnown RBP21.91■■□□□ 1.1
MCF2L-201ENST00000261963 MNX1P50219 401 aaPredicted RBP21.91■■□□□ 1.1
MCF2L-201ENST00000261963 ACOX1Q15067 660 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 CATSPEREQ5SY80 951 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 SLX4IPQ5VYV7 408 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 LAIR2Q6ISS4 152 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 FBXO30Q8TB52 745 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 SLC12A9Q9BXP2 914 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 ASPSCR1Q9BZE9 553 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 TRIT1Q9H3H1 467 aaKnown RBP21.91■■□□□ 1.1
MCF2L-201ENST00000261963 DSN1Q9H410 356 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 DENND4CQ5VZ89 1909 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 NOTOA8MTQ0 251 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 CENPBD1B2RD01 187 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 GUCY1B2O75343 617 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 DLGAP3O95886 979 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 KRT6AP02538 564 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 KRT6BP04259 564 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 PIGAP37287 484 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 KRT6CP48668 564 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 HSPA14Q0VDF9 509 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 SMUG1Q53HV7 270 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 DET1Q7L5Y6 550 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 P2RY8Q86VZ1 359 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 HEATR4Q86WZ0 1026 aa21.91■■□□□ 1.1
MCF2L-201ENST00000261963 RAVER1Q8IY67 606 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms