RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 P2RX2Q9UBL9 471 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 PEX16Q9Y5Y5 336 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 PRORSD1PA6NEY8 169 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ARVCFO00192 962 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 PRH1P02810 166 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 CBLP22681 906 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 GGT5P36269 586 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 PTPRCAPQ14761 206 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ABCA11PQ4W5N1 156 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 LRRC66Q68CR7 880 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 OSTM1Q86WC4 334 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 NIPA2Q8N8Q9 360 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ANKFN1Q8N957 763 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 DNAJA4Q8WW22 397 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 OVCA2Q8WZ82 227 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TMEM209Q96SK2 561 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 KAT8Q9H7Z6 458 aaKnown RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 C12orf4Q9NQ89 552 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 EIF3KQ9UBQ5 218 aaKnown RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 CHD2O14647 1828 aaKnown RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 S100A6P06703 90 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 MAN2A2P49641 1150 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 UFM1P61960 85 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TLE2Q04725 743 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 PDGFRLQ15198 375 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ADGRF1Q5T601 910 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 SMYD5Q6GMV2 418 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 LGI4Q8N135 537 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 FAM46DQ8NEK8 389 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 NPLOC4Q8TAT6 608 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 LRRC58Q96CX6 371 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ADAD1Q96M93 576 aaKnown RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TTYH2Q9BSA4 534 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TTTY10Q9BZA0 68 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 UPB1Q9UBR1 384 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 B4GALT2O60909 372 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ADAM8P78325 824 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 RPP38P78345 283 aaKnown RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 BRI3BPQ8WY22 251 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CDKN2AIPNLQ96HQ2 116 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 TMEM109Q9BVC6 243 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CLIC1O00299 241 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 KMOO15229 486 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CHP2O43745 196 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 OR1I1O60431 355 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 DIRAS1O95057 198 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SCGB1D2O95969 90 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CYP11A1P05108 521 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 MAZP56270 477 aaKnown RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 MYLK3Q32MK0 819 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 DRICH1Q6PGQ1 229 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SYVN1Q86TM6 617 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 LRRTM4Q86VH4 590 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CMTM8Q8IZV2 173 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 PHC3Q8NDX5 983 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 OR4F6Q8NGB9 312 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 FUBP3Q96I24 572 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SUSD3Q96L08 255 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 LRRC3Q9BY71 257 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SEC61A2Q9H9S3 476 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 KLRF1Q9NZS2 232 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 MGAT4AQ9UM21 535 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 FAM208AQ9UK61 1670 aaKnown RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 LOC730098B7Z3J9 87 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ATP5A1P25705 553 aaKnown RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 KLHL26Q53HC5 615 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SLC29A4Q7RTT9 530 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF676Q8N7Q3 588 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 GAL3ST3Q96A11 431 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ZSCAN5BA6NJL1 495 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 INPPL1O15357 1258 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CSNK2A2P19784 350 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 NRIP1P48552 1158 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 OR12D2P58182 307 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ID2Q02363 134 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 YIPF7Q8N8F6 280 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SIPA1Q96FS4 1042 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 FAM129BQ96TA1 746 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 BARD1Q99728 777 aaKnown RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ZSCAN5AQ9BUG6 496 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SLC32A1Q9H598 525 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 TMEM165Q9HC07 324 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 FBXL12Q9NXK8 326 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 GALPQ9UBC7 116 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SAGE2PA6NJ88 616 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CD36P16671 472 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 MLLT10P55197 1068 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 SLC3A1Q07837 685 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF648Q5T619 568 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 MLIPQ5VWP3 458 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 CWF19L1Q69YN2 538 aaKnown RBP11.79□□□□□ -0.52
COL8A1-201ENST00000261037 OR8H3Q8N146 312 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF527Q8NB42 609 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 TMBIM1Q969X1 311 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 PRICKLE1Q96MT3 831 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms