RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 CEP68Q76N32 757 aa17.91■□□□□ 0.46
LRP3-201ENST00000253193 FAM32AQ9Y421 112 aaKnown RBP17.91■□□□□ 0.46
LRP3-201ENST00000253193 RETP07949 1114 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 RPS3P23396 243 aaKnown RBP eCLIP17.9■□□□□ 0.46
LRP3-201ENST00000253193 NNMTP40261 264 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 C5orf22Q49AR2 442 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 CARD16Q5EG05 197 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 UTS2BQ765I0 119 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 CSGALNACT1Q8TDX6 532 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 CHPT1Q8WUD6 406 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 VPS29Q9UBQ0 182 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 B4GALT6Q9UBX8 382 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 ERGIC3Q9Y282 383 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 MYO16Q9Y6X6 1858 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 FAM220BPB1ANY3 271 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 MT-ND2P03891 347 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 PRPS1L1P21108 318 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 CST5P28325 142 aaPredicted RBP17.9■□□□□ 0.46
LRP3-201ENST00000253193 DGKEP52429 567 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 NUDT6P53370 316 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 NCS1P62166 190 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 MACC1Q6ZN28 852 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 DPY19L3Q6ZPD9 716 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 TAGAPQ8N103 731 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 CCDC115Q96NT0 180 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 POLE4Q9NR33 117 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 KDELR2P33947 212 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 DUOXA1Q1HG43 343 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 MPPE1Q53F39 396 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 TRIM46Q7Z4K8 759 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 VRK3Q8IV63 474 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 NDNFQ8TB73 568 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 OVCA2Q8WZ82 227 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 P2RY13Q9BPV8 354 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 HEPHQ9BQS7 1158 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 ELAC1Q9H777 363 aaKnown RBP17.9■□□□□ 0.46
LRP3-201ENST00000253193 ZNF556Q9HAH1 456 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 TPT1P8Q9HAU6 139 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 TMEM45AQ9NWC5 275 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 THG1LQ9NWX6 298 aaKnown RBP17.9■□□□□ 0.46
LRP3-201ENST00000253193 THUMPD1Q9NXG2 353 aaKnown RBP17.9■□□□□ 0.46
LRP3-201ENST00000253193 ZNF639Q9UID6 485 aa17.9■□□□□ 0.46
LRP3-201ENST00000253193 SCN4AP35499 1836 aa17.89■□□□□ 0.46
LRP3-201ENST00000253193 KRBA1A5PL33 1030 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 AOC2O75106 756 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 CPNE6O95741 557 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 DNAJA1P31689 397 aaKnown RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 VMACQ2NL98 169 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 ZNF284Q2VY69 593 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 Q6ZVL8 140 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 ELMOD1Q8N336 334 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 C1orf52Q8N6N3 182 aaKnown RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 ZNF513Q8N8E2 541 aaPredicted RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 ASZ1Q8WWH4 475 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 CMTM7Q96FZ5 175 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 ZNF558Q96NG5 402 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 TMEM175Q9BSA9 504 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 EMILIN2Q9BXX0 1053 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 CWH43Q9H720 699 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 PCDH10Q9P2E7 1040 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 FZD4Q9ULV1 537 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 SNX8Q9Y5X2 465 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 C8GP07360 202 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 HTR1AP08908 422 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 CD36P16671 472 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 CD9P21926 228 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 CHI3L1P36222 383 aaPredicted RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 PREPP48147 710 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 SEPHS1P49903 392 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 ISL1P61371 349 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 DDX53Q86TM3 631 aaKnown RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 CYP4Z1Q86W10 505 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 STX19Q8N4C7 294 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 C2orf73Q8N5S3 287 aaPredicted RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 TRUB1Q8WWH5 349 aaKnown RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 FOXJ1Q92949 421 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 CPPED1Q9BRF8 314 aaPredicted RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 RHNO1Q9BSD3 238 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 DUSP26Q9BV47 211 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 YIPF2Q9BWQ6 316 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 FAM83DQ9H4H8 585 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 DICER1Q9UPY3 1922 aaKnown RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 WNT9AO14904 365 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 FZD6O60353 706 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 ALDH1A1P00352 501 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 ATP1B2P14415 290 aaPredicted RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 TNFRSF1BP20333 461 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 TMPRSS11BQ86T26 416 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 ZNF366Q8N895 744 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 HERC2P3Q9BVR0 1158 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 RETREG1Q9H6L5 497 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 EXOSC4Q9NPD3 245 aaKnown RBP17.89■□□□□ 0.45
LRP3-201ENST00000253193 SRRDQ9UH36 339 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 PPT2Q9UMR5 302 aa17.89■□□□□ 0.45
LRP3-201ENST00000253193 A8MU76 341 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 LAMP1P11279 417 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 OR1E2P47887 323 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 NEK5Q6P3R8 708 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 LRRC70Q7Z2Q7 622 aa17.88■□□□□ 0.45
LRP3-201ENST00000253193 OR4A15Q8NGL6 344 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms