RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CEBPBP17676 345 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 IMPA1P29218 277 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 ST8SIA6P61647 398 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 CAMK1Q14012 370 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 ACOX1Q15067 660 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 BCL7AQ4VC05 210 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 TMEM220Q6QAJ8 160 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 ZNF765Q7L2R6 523 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 LPCAT2Q7L5N7 544 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 ZNF551Q7Z340 670 aaPredicted RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 GPR155Q7Z3F1 870 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 GPR141Q7Z602 305 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 SYT12Q8IV01 421 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 CLEC4FQ8N1N0 589 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 ZCCHC7Q8N3Z6 543 aaKnown RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 OR5K1Q8NHB7 308 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 ZNF707Q96C28 371 aaPredicted RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 MUS81Q96NY9 551 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 PKP4Q99569 1192 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 RBM4BQ9BQ04 359 aaKnown RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 RBM4Q9BWF3 364 aaKnown RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 REXO4Q9GZR2 422 aaKnown RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 DDX18Q9NVP1 670 aaKnown RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 GULP1Q9UBP9 304 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 RWDD3Q9Y3V2 267 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 MAGED1Q9Y5V3 778 aaPredicted RBP15.66■□□□□ 0.1
UBE3D-201ENST00000237186 MYOFQ9NZM1 2061 aa15.66■□□□□ 0.1
UBE3D-201ENST00000237186 LRATO95237 230 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 SLC16A8O95907 504 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 SERPINA1P01009 418 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PRNPP04156 253 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 GPX2P18283 190 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 CALRP27797 417 aaKnown RBP15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PCSK6P29122 969 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 CCR3P51677 355 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 GRIN2CQ14957 1233 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 RBBP5Q15291 538 aaKnown RBP15.65■□□□□ 0.1
UBE3D-201ENST00000237186 CCSMST1Q4G0I0 132 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 DOK6Q6PKX4 331 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 CAMKMTQ7Z624 323 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 TMIEQ8NEW7 156 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 NCLNQ969V3 563 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 HIC2Q96JB3 615 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 FOPNLQ96NB1 174 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 NPLQ9BXD5 320 aaPredicted RBP15.65■□□□□ 0.1
UBE3D-201ENST00000237186 AASDHPPTQ9NRN7 309 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 UTS2RQ9UKP6 389 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PLXNA2O75051 1894 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 C5orf67F2Z3F1 127 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 CLGNO14967 610 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 SPINT1O43278 529 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 TLL1O43897 1013 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 B3GALT4O96024 378 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 ADH1CP00326 375 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 SOD1P00441 154 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 IRS1P35568 1242 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 DCTP40126 519 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PREPP48147 710 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PNLIPRP1P54315 467 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 C10orf62Q5T681 223 aaPredicted RBP15.65■□□□□ 0.1
UBE3D-201ENST00000237186 ERICH5Q6P6B1 374 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PSRC1Q6PGN9 363 aaPredicted RBP15.65■□□□□ 0.1
UBE3D-201ENST00000237186 THAP5Q7Z6K1 395 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 ETFBKMTQ8IXQ9 262 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 RNF175Q8N4F7 328 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 LILRA3Q8N6C8 439 aaPredicted RBP15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PHOSPHO2Q8TCD6 241 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 WDR34Q96EX3 536 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 PHF12Q96QT6 1004 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 TIMMDC1Q9NPL8 285 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 FAM118AQ9NWS6 357 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 SIRT5Q9NXA8 310 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 SAMD4AQ9UPU9 718 aaKnown RBP15.65■□□□□ 0.1
UBE3D-201ENST00000237186 KCNE2Q9Y6J6 123 aa15.65■□□□□ 0.1
UBE3D-201ENST00000237186 DOCK6Q96HP0 2047 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 CLIC1O00299 241 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 GNGT2O14610 69 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 LILRB5O75023 590 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 MYO1DO94832 1006 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 C1orf105O95561 183 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 MYCLP1P12525 358 aaPredicted RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 ASMTP46597 345 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 ACSM2AQ08AH3 577 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 BIRC2Q13490 618 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 ZIK1Q3SY52 487 aaPredicted RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 ZC3H12BQ5HYM0 836 aaKnown RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 CPZQ66K79 652 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 ACSM2BQ68CK6 577 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 CES5AQ6NT32 575 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 HIPK1Q86Z02 1210 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 CHPFQ8IZ52 775 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 CPA6Q8N4T0 437 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 OR7G3Q8NG95 312 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 CHTF18Q8WVB6 975 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 CNDP2Q96KP4 475 aaKnown RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 LINC00615Q96LM1 132 aaPredicted RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 PANX1Q96RD7 426 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 MTERF1Q99551 399 aaKnown RBP15.64■□□□□ 0.09
UBE3D-201ENST00000237186 TUBA1CQ9BQE3 449 aa15.64■□□□□ 0.09
UBE3D-201ENST00000237186 TOR3AQ9H497 397 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms