RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 MESP2Q0VG99 397 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CDK5R2Q13319 367 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 DOC2AQ14183 400 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SPATS1Q496A3 300 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 TCEAL8Q8IYN2 117 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CHPFQ8IZ52 775 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 GLB1L3Q8NCI6 653 aaPredicted RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 FNDC8Q8TC99 324 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 MCOLN3Q8TDD5 553 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ING5Q8WYH8 240 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 YME1L1Q96TA2 773 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 RBM4BQ9BQ04 359 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 RBM4Q9BWF3 364 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 FAM83DQ9H4H8 585 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 DNAJC11Q9NVH1 559 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 DNAAF2Q9NVR5 837 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SIRT5Q9NXA8 310 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 KCNE1BA0A087WTH5 132 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ARHGEF33A8MVX0 844 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 EVPLLA8MZ36 301 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 M0R129 80 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 BCAS1O75363 584 aaPredicted RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CXCL14O95715 111 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 GRIN2CQ14957 1233 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 LY6G5CQ5SRR4 150 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CPZQ66K79 652 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ZNF852Q6ZMS4 543 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 HTR3DQ70Z44 454 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SPRED2Q7Z698 418 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CACUL1Q86Y37 369 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 C1orf52Q8N6N3 182 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ATG16L2Q8NAA4 619 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 OR2A12Q8NGT7 310 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 OR5K1Q8NHB7 308 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CCDC115Q96NT0 180 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 NODALQ96S42 347 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SH3GL1Q99961 368 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 TMEM39AQ9NV64 488 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 PRUNE2Q8WUY3 3088 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 A0A096LPI6 279 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 HIDE1A8MVS5 230 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SGTAO43765 313 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ERN1O75460 977 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 KCNK5O95279 499 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ANGPTL1O95841 491 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 FADS2O95864 444 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SLC16A8O95907 504 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 VIPP01282 170 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 C7P10643 843 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 PPP3CCP48454 512 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CLK3P49761 638 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 RAD23AP54725 363 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 GP2P55259 537 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 WNT3P56703 355 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 VBP1P61758 197 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 EMX1Q04741 257 aaPredicted RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 TEAD2Q15562 447 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 PERM1Q5SV97 790 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CATSPEREQ5SY80 951 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 THOC6Q86W42 341 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 CALHM3Q86XJ0 350 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 OR5AK3PQ8NH89 298 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 RPL3LQ92901 407 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 PLEKHA8Q96JA3 519 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 OR4K3Q96R72 315 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ACAT2Q9BWD1 397 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 RETREG1Q9H6L5 497 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 RMND5AQ9H871 391 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 TMEM184CQ9NVA4 438 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 ACSL6Q9UKU0 697 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SAMHD1Q9Y3Z3 626 aaKnown RBP8.86□□□□□ -0.99
SYDE2-201ENST00000234668 SNX5Q9Y5X3 404 aa8.86□□□□□ -0.99
SYDE2-201ENST00000234668 TRAV19A0A0A6YYK7 116 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 GNG14A0A1W2PPG7 69 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 GABRR3A8MPY1 467 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 SEC14L2O76054 403 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 POP4O95707 220 aaKnown RBP8.85□□□□□ -0.99
SYDE2-201ENST00000234668 OLFM2O95897 454 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 TGFB1P01137 390 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 TYRP14679 529 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 POU2F1P14859 743 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 PSMB9P28065 219 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 ACSM2AQ08AH3 577 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 GBX1Q14549 363 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 STARD3Q14849 445 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
SYDE2-201ENST00000234668 NPTX1Q15818 432 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 TMEM236Q5W0B7 351 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 ATG9BQ674R7 924 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 ACSM2BQ68CK6 577 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 GTF2IRD2BQ6EKJ0 949 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 GDPD4Q6W3E5 623 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 GTF2IRD2Q86UP8 949 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 TMC8Q8IU68 726 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 MMP21Q8N119 569 aa8.85□□□□□ -0.99
SYDE2-201ENST00000234668 ZCCHC7Q8N3Z6 543 aaKnown RBP8.85□□□□□ -0.99
SYDE2-201ENST00000234668 HSH2DQ96JZ2 352 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms