RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SVOPLQ8N434 492 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 YIPF7Q8N8F6 280 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 SKA2Q8WVK7 121 aaPredicted RBP13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 KCNC2Q96PR1 638 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 KRT84Q9NSB2 600 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 GLTPQ9NZD2 209 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 ATPIF1Q9UII2 106 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.2
PCDHB3-201ENST00000231130 ARL5CA6NH57 179 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 HMX3A6NHT5 357 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 COL6A1P12109 1028 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 KRT20P35900 424 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 CREMQ03060 361 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 TIGD6Q17RP2 521 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 MS4A13Q5J8X5 152 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 RGMBQ6NW40 437 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 MSANTD2Q6P1R3 559 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 MBOAT1Q6ZNC8 495 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 CCDC117Q8IWD4 279 aaPredicted RBP13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 TIGD4Q8IY51 512 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 CLDN19Q8N6F1 224 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 MYEOVQ96EZ4 313 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 PPP1R2P1Q96PQ5 205 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 GON7Q9BXV9 100 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 ACOXLQ9NUZ1 547 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 B3GALNT1O75752 331 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 HPRP00739 348 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 CA5AP35218 305 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 FCGRTP55899 365 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 SLC35A2P78381 396 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 DOK6Q6PKX4 331 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 KCTD20Q7Z5Y7 419 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 HIPK1Q86Z02 1210 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF557Q8N988 423 aaPredicted RBP13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 SETD9Q8NE22 299 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 OR52J3Q8NH60 311 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 NPLOC4Q8TAT6 608 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 SLC7A6Q92536 515 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 DPH2Q9BQC3 489 aaPredicted RBP13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 ZMAT5Q9UDW3 170 aaKnown RBP13.77□□□□□ -0.21
PCDHB3-201ENST00000231130 LTBP3Q9NS15 1303 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 EFCAB10A6NFE3 127 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 RGRP47804 291 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 MRPL28Q13084 256 aaKnown RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 EIF2B5Q13144 721 aaKnown RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 MFSD10Q14728 455 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 C10orf120Q5SQS8 335 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 LIMS2Q7Z4I7 341 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 TMEM86AQ8N2M4 240 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 NKAPQ8N5F7 415 aaKnown RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 GPRC5AQ8NFJ5 357 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 UTP15Q8TED0 518 aaKnown RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 TMCO6Q96DC7 493 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 TM9SF2Q99805 663 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 CDADC1Q9BWV3 514 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 BTBD2Q9BX70 525 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 FAM105AQ9NUU6 356 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 MKLN1Q9UL63 735 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF490Q9ULM2 529 aaPredicted RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 CPSF4O95639 269 aaKnown RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 CLEC2LP0C7M8 214 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 ODC1P11926 461 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 IL18R1Q13478 541 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 DUSP28Q4G0W2 176 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 KLHL17Q6TDP4 642 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 ANGPTL8Q6UXH0 198 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF598Q86UK7 904 aaKnown RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 MSRB3Q8IXL7 192 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 CACTIN-AS1Q8N1I8 211 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 ENKURQ8TC29 256 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 SLC30A2Q9BRI3 323 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 COPS4Q9BT78 406 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 ITPAQ9BY32 194 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 LATS2Q9NRM7 1088 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 TAS2R16Q9NYV7 291 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 FAM8A1Q9UBU6 413 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 ST3GAL5Q9UNP4 418 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 LYVE1Q9Y5Y7 322 aa13.76□□□□□ -0.21
PCDHB3-201ENST00000231130 STX7O15400 261 aaKnown RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 MYL9P24844 172 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 TWF1Q12792 350 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 FAPQ12884 760 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 GBX1Q14549 363 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 MANEALQ5VSG8 457 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 DPP10Q8N608 796 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 MDGA1Q8NFP4 955 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 KBTBD8Q8NFY9 601 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 RIPOR3Q96MK2 946 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 WWOXQ9NZC7 414 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ACSL4O60488 711 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ULK1O75385 1050 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 FGF1P05230 155 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 POU2F1P14859 743 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 POU3F3P20264 500 aaPredicted RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 AKR1D1P51857 326 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ZXDBP98169 803 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 SEMG2Q02383 582 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms