RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PCDHGA12O60330 932 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 OR2B6P58173 313 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ARFRP1Q13795 201 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 NPTX1Q15818 432 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 PLEKHG6Q3KR16 790 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 MBLAC2Q68D91 279 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.27□□□□□ -0.61
LAMA4-201ENST00000230538 SLC29A4Q7RTT9 530 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.61
LAMA4-201ENST00000230538 DBF4BQ8NFT6 615 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 TOR3AQ9H497 397 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 USP29Q9HBJ7 922 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 MOV10Q9HCE1 1003 aaKnown RBP11.27□□□□□ -0.61
LAMA4-201ENST00000230538 POFUT2Q9Y2G5 429 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ILVBLA1L0T0 632 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 L7N2F9 121 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 RB1P06400 928 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 SLC2A2P11168 524 aaPredicted RBP11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ADH5P11766 374 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 ATP1B2P14415 290 aaPredicted RBP11.27□□□□□ -0.61
LAMA4-201ENST00000230538 VAMP2P63027 116 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 PCBP2Q15366 365 aaKnown RBP eCLIP11.27□□□□□ -0.61
LAMA4-201ENST00000230538 CHRNA6Q15825 494 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 RUNDC3AQ59EK9 446 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 KLHDC10Q6PID8 442 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 TMEM17Q86X19 198 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 RASGRP3Q8IV61 690 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 NXPE2Q96DL1 559 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 BRD7Q9NPI1 651 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 C14orf105Q9NVL8 296 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 CDC14AQ9UNH5 594 aa11.27□□□□□ -0.61
LAMA4-201ENST00000230538 A0A1W2PRQ8 180 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 ERI3O43414 337 aaKnown RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 SIX3O95343 332 aaPredicted RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 BDKRB1P46663 353 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 PRKCZQ05513 592 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CBLBQ13191 982 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 DUOXA1Q1HG43 343 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 C2orf27AQ580R0 203 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 OR4F3Q6IEY1 312 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 C9orf43Q8TAL5 461 aaPredicted RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CEP76Q8TAP6 659 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 OVCA2Q8WZ82 227 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 ASB9Q96DX5 294 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 SLC6A15Q9H2J7 730 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CDC7O00311 574 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 SLC22A1O15245 554 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 VIPR1P32241 457 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 COLEC12Q5KU26 742 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 HFE2Q6ZVN8 426 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 LYSMD3Q7Z3D4 306 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CEP97Q8IW35 865 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 EBF2Q9HAK2 575 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CD320Q9NPF0 282 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 UTS2RQ9UKP6 389 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 A8MT66 165 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 TMEM233B4DJY2 109 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 MTX2O75431 263 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CBSLP0DN79 551 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 GSTM3P21266 225 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CBSP35520 551 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 OR12D2P58182 307 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 NFATC2Q13469 925 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 TSTD1Q8NFU3 115 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 FBXO9Q9UK97 447 aaPredicted RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 PPM1HQ9ULR3 514 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 PCP4L1A6NKN8 68 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CAPN14A8MX76 684 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 SCDO00767 359 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 H1F0P07305 194 aaKnown RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 AGXTP21549 392 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 FSHRP23945 695 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 ADGRF1Q5T601 910 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 LRRTM4Q86VH4 590 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 SUN3Q8TAQ9 357 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 SCLYQ96I15 445 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 AIFM2Q9BRQ8 373 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 MND1Q9BWT6 205 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 GPR88Q9GZN0 384 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 OSBPL2Q9H1P3 480 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 NKX1-2Q9UD57 310 aaPredicted RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 ZDHHC2Q9UIJ5 367 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 IFT172Q9UG01 1749 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 WASHC1A8K0Z3 465 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 WASH3PC4AMC7 463 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 CDC40O60508 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 OPN1SWP03999 348 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 PLGLB1Q02325 96 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 WASH2PQ6VEQ5 465 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 PIM3Q86V86 326 aa11.26□□□□□ -0.61
LAMA4-201ENST00000230538 THOC6Q86W42 341 aaKnown RBP11.26□□□□□ -0.61
LAMA4-201ENST00000230538 C1orf52Q8N6N3 182 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms