RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 NOVA2Q9UNW9 492 aaKnown RBP13.15□□□□□ -0.3
VEGFA-201ENST00000230480 ASB1Q9Y576 335 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 PCDHGA6Q9Y5G7 932 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 SPTA1P02549 2419 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 SCN2AQ99250 2005 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 P2RX6O15547 441 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 LCMT2O60294 686 aaKnown RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 KDM1AO60341 852 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 OR2B3O76000 313 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 SYF2O95926 243 aaKnown RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 ALDOAP04075 364 aaKnown RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 HSD17B2P37059 387 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 MAGEA12P43365 314 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 CSNK1G2P78368 415 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 DNASE1L3Q13609 305 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 BMPR2Q13873 1038 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 LRRC8EQ6NSJ5 796 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 RHBDD2Q6NTF9 364 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 COX15Q7KZN9 410 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 VN1R4Q7Z5H5 301 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 ISCA2Q86U28 154 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 TMEM126BQ8IUX1 230 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 CTAGE3PQ8IX95 158 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 SYTL1Q8IYJ3 562 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 CENPLQ8N0S6 344 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 MYO1HQ8N1T3 1032 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 IL22RA1Q8N6P7 574 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 ZNF655Q8N720 491 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 EXD3Q8N9H8 876 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 MCOLN3Q8TDD5 553 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 SLC44A1Q8WWI5 657 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 PYCR2Q96C36 320 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 FBXL8Q96CD0 374 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 FMO2Q99518 471 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 DERL2Q9GZP9 239 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 ACTR5Q9H9F9 607 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 UTP6Q9NYH9 597 aaKnown RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 DHCR7Q9UBM7 475 aaKnown RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 SERTAD3Q9UJW9 196 aa13.14□□□□□ -0.31
VEGFA-201ENST00000230480 MRPS2Q9Y399 296 aaKnown RBP13.14□□□□□ -0.31
VEGFA-201ENST00000230480 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 A0A0J9YVX5 310 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 H0YGG7 62 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 H7BY64 318 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 HAT1O14929 419 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 CPNE3O75131 537 aaKnown RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 KLF7O75840 302 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 ACSL3O95573 720 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 MTHFD2P13995 350 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 TCN2P20062 427 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 STX2P32856 288 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 DLSTP36957 453 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 SLC6A12P48065 614 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 UCNP55089 124 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 ARF3P61204 181 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 IRF9Q00978 393 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 RELAQ04206 551 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 USP10Q14694 798 aaKnown RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 TBR1Q16650 682 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 KLHDC8AQ8IYD2 350 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 PLD6Q8N2A8 252 aaKnown RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 NKAPQ8N5F7 415 aaKnown RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 OR4K1Q8NGD4 311 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 GABPB2Q8TAK5 448 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 UHMK1Q8TAS1 419 aaKnown RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 ADAMTS17Q8TE56 1095 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 DCAKDQ8WVC6 231 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 ISL2Q96A47 359 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 MRRFQ96E11 262 aaKnown RBP13.13□□□□□ -0.31
VEGFA-201ENST00000230480 C10orf90Q96M02 699 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 PRAP1Q96NZ9 151 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 TMEM79Q9BSE2 394 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 GPAMQ9HCL2 828 aa13.13□□□□□ -0.31
VEGFA-201ENST00000230480 E7EQ34 232 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 C1QL1O75973 258 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 GUCA1CO95843 209 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 CCDC166P0CW27 439 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 EPORP19235 508 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 CMPK1P30085 196 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 RPA3P35244 121 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-201ENST00000230480 SPRP35270 261 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-201ENST00000230480 GDF5P43026 501 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 ATP1A2P50993 1020 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 EFNA3P52797 238 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 RAB10P61026 200 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 NAB1Q13506 487 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 IL10RAQ13651 578 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 FBXO48Q5FWF7 155 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 WASHC2DQ5SRD0 308 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 CATSPEREQ5SY80 951 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 C1orf189Q5VU69 101 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 BROXQ5VW32 411 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 MRPL14Q6P1L8 145 aaKnown RBP13.12□□□□□ -0.31
VEGFA-201ENST00000230480 LCTLQ6UWM7 567 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 ZNF740Q8NDX6 193 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 ABHD11Q8NFV4 315 aa13.12□□□□□ -0.31
VEGFA-201ENST00000230480 STARD8Q92502 1023 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms