RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 SDC1P18827 310 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 EIF2DP41214 584 aaKnown RBP16.98■□□□□ 0.31
PRPF19-201ENST00000227524 VLDLRP98155 873 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 NFATC2Q13469 925 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 ARHGEF7Q14155 803 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 BCL2A1Q16548 175 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 TMCO2Q7Z6W1 182 aaPredicted RBP16.98■□□□□ 0.31
PRPF19-201ENST00000227524 GALNT10Q86SR1 603 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 SERPINA11Q86U17 422 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 CCDC71Q8IV32 467 aaPredicted RBP16.98■□□□□ 0.31
PRPF19-201ENST00000227524 SELENOMQ8WWX9 145 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 ZHX1-C8orf76Q96EF9 292 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 SIGLEC11Q96RL6 698 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 TTLL2Q9BWV7 592 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 ANKHQ9HCJ1 492 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 AASDHPPTQ9NRN7 309 aa16.98■□□□□ 0.31
PRPF19-201ENST00000227524 PNMA8BQ9ULN7 279 aaPredicted RBP16.98■□□□□ 0.31
PRPF19-201ENST00000227524 TTC36A6NLP5 189 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 EFCAB9A8MZ26 197 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 LRATO95237 230 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 ITGALP20701 1170 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 EFNA1P20827 205 aaPredicted RBP16.97■□□□□ 0.31
PRPF19-201ENST00000227524 ACRV1P26436 265 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 RHOAP61586 193 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 PLEKHG6Q3KR16 790 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 ZCCHC8Q6NZY4 707 aaKnown RBP16.97■□□□□ 0.31
PRPF19-201ENST00000227524 CNKSR3Q6P9H4 555 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 ANKS3Q6ZW76 656 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 PGBD3Q8N328 593 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 MCFD2Q8NI22 146 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 PSMA8Q8TAA3 256 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 IPCEF1Q8WWN9 437 aaPredicted RBP16.97■□□□□ 0.31
PRPF19-201ENST00000227524 NELL1Q92832 810 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 PITX2Q99697 317 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 LATS2Q9NRM7 1088 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 RASSF1Q9NS23 344 aa16.97■□□□□ 0.31
PRPF19-201ENST00000227524 THG1LQ9NWX6 298 aaKnown RBP16.97■□□□□ 0.31
PRPF19-201ENST00000227524 FCF1Q9Y324 198 aaKnown RBP16.97■□□□□ 0.31
PRPF19-201ENST00000227524 SAMHD1Q9Y3Z3 626 aaKnown RBP16.97■□□□□ 0.31
PRPF19-201ENST00000227524 EVPLLA8MZ36 301 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 WBP4O75554 376 aaKnown RBP16.96■□□□□ 0.31
PRPF19-201ENST00000227524 STC2O76061 302 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 GSTT2P0CG29 244 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 GSTT2BP0CG30 244 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.31
PRPF19-201ENST00000227524 HNRNPFP52597 415 aaKnown RBP16.96■□□□□ 0.31
PRPF19-201ENST00000227524 ARMC12Q5T9G4 340 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 UBE2UQ5VVX9 321 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 OR4F3Q6IEY1 312 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 AHSA2Q719I0 299 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 VTCN1Q7Z7D3 282 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 ARMC8Q8IUR7 673 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 LACC1Q8IV20 430 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 ZZZ3Q8IYH5 903 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 FAM9CQ8IZT9 166 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 PIH1D2Q8WWB5 315 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 UBE2FQ969M7 185 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 PLD4Q96BZ4 506 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 HHIPQ96QV1 700 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 EPS8L2Q9H6S3 715 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 TMEM39AQ9NV64 488 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 ZNF229Q9UJW7 825 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 RPS6KA6Q9UK32 745 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 TRBV5-4A0A0C4DH59 114 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 COCHO43405 550 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 MYO1DO94832 1006 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 PGLSO95336 258 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 RPL17P18621 184 aaKnown RBP16.96■□□□□ 0.31
PRPF19-201ENST00000227524 CDC20Q12834 499 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 VMACQ2NL98 169 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 PROX2Q3B8N5 592 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 CCDC92Q53HC0 331 aaPredicted RBP16.96■□□□□ 0.31
PRPF19-201ENST00000227524 SLC8B1Q6J4K2 584 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 MACC1Q6ZN28 852 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 MSANTD1Q6ZTZ1 278 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 HOMEZQ8IX15 550 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 KIAA1958Q8N8K9 716 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 ATG16L2Q8NAA4 619 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 FBXO22Q8NEZ5 403 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 APH1BQ8WW43 257 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 DCSTAMPQ9H295 470 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 RC3H2Q9HBD1 1191 aaKnown RBP16.96■□□□□ 0.31
PRPF19-201ENST00000227524 GKN1Q9NS71 199 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 SIRT5Q9NXA8 310 aa16.96■□□□□ 0.31
PRPF19-201ENST00000227524 H7C4K7 107 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 UPK1BO75841 260 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 ANXA5P08758 320 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 BMP1P13497 986 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 PRPH2P23942 346 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 MAPK1P28482 360 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 MZF1P28698 734 aaPredicted RBP16.95■□□□□ 0.3
PRPF19-201ENST00000227524 SERPINB1P30740 379 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 PPP3CCP48454 512 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 NEK2P51955 445 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 CREMQ03060 361 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 SELENBP1Q13228 472 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 LRRC26Q2I0M4 334 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 FAHD1Q6P587 224 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 SLC38A4Q969I6 547 aa16.95■□□□□ 0.3
PRPF19-201ENST00000227524 CMTM7Q96FZ5 175 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms