RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 DLX3O60479 287 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 SDC3O75056 442 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 BCHEP06276 602 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 DBIP07108 87 aaKnown RBP17.97■□□□□ 0.47
CLIP2-201ENST00000223398 KRT74Q7RTS7 529 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF527Q8NB42 609 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 CHST4Q8NCG5 386 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 TGM7Q96PF1 710 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 TMEM109Q9BVC6 243 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 IFT80Q9P2H3 777 aaPredicted RBP17.97■□□□□ 0.47
CLIP2-201ENST00000223398 SESN1Q9Y6P5 492 aa17.97■□□□□ 0.47
CLIP2-201ENST00000223398 MYOCOSA0A1B0GUC4 107 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 FAM159BA6NKW6 160 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 CTSAP10619 480 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 ENGP17813 658 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 DSTNP60981 165 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 RBBP4Q09028 425 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 RIPK1Q13546 671 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 USP53Q70EK8 1073 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 UTS2BQ765I0 119 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 C17orf62Q9BQA9 187 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 GIN1Q9NXP7 522 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 BACE2Q9Y5Z0 518 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 BAZ2AQ9UIF9 1905 aaKnown RBP17.96■□□□□ 0.47
CLIP2-201ENST00000223398 MUSKO15146 869 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 SSNA1O43805 119 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 HEXBP07686 556 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 CLEC12AQ5QGZ9 265 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 NECTIN4Q96NY8 510 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 TRIM8Q9BZR9 551 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 SPEF2Q9C093 1822 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 FAM221BA6H8Z2 402 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 PRORSD1PA6NEY8 169 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF726A6NNF4 738 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 C9P02748 559 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 RPL26P61254 145 aaKnown RBP17.96■□□□□ 0.47
CLIP2-201ENST00000223398 DPY19L1Q2PZI1 675 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 ANKRD26P1Q6NSI1 321 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF852Q6ZMS4 543 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 TBX5Q99593 518 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 ABCB9Q9NP78 766 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 TMLHEQ9NVH6 421 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 HCFC1R1Q9NWW0 138 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 HCN2Q9UL51 889 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 RPL26L1Q9UNX3 145 aaKnown RBP17.96■□□□□ 0.47
CLIP2-201ENST00000223398 OR6C74A6NCV1 312 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 MANBAO00462 879 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 SCDO00767 359 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 KCNA7Q96RP8 456 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 STRADBQ9C0K7 418 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 BRD7Q9NPI1 651 aa17.96■□□□□ 0.47
CLIP2-201ENST00000223398 DOT1LQ8TEK3 1739 aa17.96■□□□□ 0.46
CLIP2-201ENST00000223398 S100GP29377 79 aa17.96■□□□□ 0.46
CLIP2-201ENST00000223398 TTKP33981 857 aa17.96■□□□□ 0.46
CLIP2-201ENST00000223398 MYBPC3Q14896 1274 aa17.96■□□□□ 0.46
CLIP2-201ENST00000223398 KBTBD6Q86V97 674 aa17.96■□□□□ 0.46
CLIP2-201ENST00000223398 ZDHHC18Q9NUE0 388 aa17.96■□□□□ 0.46
CLIP2-201ENST00000223398 HAT1O14929 419 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 RSL1D1O76021 490 aaKnown RBP17.95■□□□□ 0.46
CLIP2-201ENST00000223398 PDX1P52945 283 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 NR1H2P55055 460 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 DPYSQ14117 519 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 SMU1Q2TAY7 513 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 IL22RA1Q8N6P7 574 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 MUC13Q9H3R2 512 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 LYNP07948 512 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 PXNP49023 591 aaPredicted RBP17.95■□□□□ 0.46
CLIP2-201ENST00000223398 CLCN4P51793 760 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 RING1Q06587 406 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 CRTC1Q6UUV9 634 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 SPATA7Q9P0W8 599 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 PHF11Q9UIL8 331 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 CLIC1O00299 241 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 AP2A2O94973 939 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 CD70P32970 193 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 RBM44Q6ZP01 1051 aaKnown RBP17.95■□□□□ 0.46
CLIP2-201ENST00000223398 THAP5Q7Z6K1 395 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 AP3S1Q92572 193 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 IL1RAPQ9NPH3 570 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 FTSJ1Q9UET6 329 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 CYTH4Q9UIA0 394 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 CACNA1FO60840 1977 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 SOCS5O75159 536 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 RPS9P46781 194 aaKnown RBP17.95■□□□□ 0.46
CLIP2-201ENST00000223398 GPX6P59796 221 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 ADGRE1Q14246 886 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 B3GNT6Q6ZMB0 384 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 ZNF395Q9H8N7 513 aaPredicted RBP17.95■□□□□ 0.46
CLIP2-201ENST00000223398 P2RX2Q9UBL9 471 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 APOBEC3BQ9UH17 382 aaKnown RBP17.95■□□□□ 0.46
CLIP2-201ENST00000223398 ZDHHC2Q9UIJ5 367 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 MYO9BQ13459 2157 aa17.95■□□□□ 0.46
CLIP2-201ENST00000223398 UBE2QL1A1L167 161 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 HOXB6P17509 224 aaKnown RBP17.94■□□□□ 0.46
CLIP2-201ENST00000223398 PUM1Q14671 1186 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLIP2-201ENST00000223398 GLYATL1Q969I3 302 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 SLC2A13Q96QE2 648 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 GORASP1Q9BQQ3 440 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 Q9N2J8 555 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 MID1O15344 667 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms