RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ARMC7Q9H6L4 198 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 SH3BP4Q9P0V3 963 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 SLC25A13Q9UJS0 675 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 ITM2BQ9Y287 266 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 HCFC2Q9Y5Z7 792 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 SH3PXD2BA1X283 911 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 TSPAN6O43657 245 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 LEFTY1O75610 366 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 RFPL2O75678 378 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 RETP07949 1114 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 PDHA2P29803 388 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 NRIP1P48552 1158 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 ABHD18Q0P651 414 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 ITGADQ13349 1161 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 LRIF1Q5T3J3 769 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 IER5LQ5T953 404 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 LAIR1Q6GTX8 287 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 DHRS4L2Q6PKH6 230 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 Q6ZPB1 254 aaPredicted RBP14.17□□□□□ -0.14
CNOT3-201ENST00000221232 LRRC70Q7Z2Q7 622 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 THOC6Q86W42 341 aaKnown RBP14.17□□□□□ -0.14
CNOT3-201ENST00000221232 C2orf73Q8N5S3 287 aaPredicted RBP14.17□□□□□ -0.14
CNOT3-201ENST00000221232 ATG16L2Q8NAA4 619 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 VWCEQ96DN2 955 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 REXO5Q96IC2 774 aaKnown RBP14.17□□□□□ -0.14
CNOT3-201ENST00000221232 YME1L1Q96TA2 773 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 CDH7Q9ULB5 785 aa14.17□□□□□ -0.14
CNOT3-201ENST00000221232 ZBBXA8MT70 800 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 MAGEB17A8MXT2 336 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF701M0R085 212 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 KCNK5O95279 499 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 CXCL14O95715 111 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 ANGPTL1O95841 491 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 OPN1SWP03999 348 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 C8GP07360 202 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 RECQLP46063 649 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 SLC6A12P48065 614 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 CSNK1DP48730 415 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 CBX2Q14781 532 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 OTOP2Q7RTS6 562 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 HORMAD1Q86X24 394 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 CHPFQ8IZ52 775 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 OR2A12Q8NGT7 310 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 PLEKHA8Q96JA3 519 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 TMEM39AQ9NV64 488 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 DNAAF2Q9NVR5 837 aaKnown RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 SAMHD1Q9Y3Z3 626 aaKnown RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 ARHGEF33A8MVX0 844 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 FADS2P1A8MWK0 482 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 WNT9AO14904 365 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 BCAS1O75363 584 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 HPRP00739 348 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 GSTM2P28161 218 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 RAD23AP54725 363 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 FPGSQ05932 587 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 ACSM2AQ08AH3 577 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 DUOXA1Q1HG43 343 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 SYTL3Q4VX76 610 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF691Q5VV52 312 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 ACSM2BQ68CK6 577 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 TMEM215Q68D42 235 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 BTLAQ7Z6A9 289 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 TMC8Q8IU68 726 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 FAM217AQ8IXS0 508 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 C1orf52Q8N6N3 182 aaKnown RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 NELL1Q92832 810 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 ECHDC3Q96DC8 303 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 SAMD11Q96NU1 681 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 WRAP53Q9BUR4 548 aaKnown RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 SGK2Q9HBY8 427 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 AMBNQ9NP70 447 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 TBC1D23Q9NUY8 699 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 VPS29Q9UBQ0 182 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 PSME2Q9UL46 239 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 EPN2O95208 641 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 CCR3P51677 355 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 MEF2AQ02078 507 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 EMX1Q04741 257 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-201ENST00000221232 GTF2IRD2BQ6EKJ0 949 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 OR2T5Q6IEZ7 315 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 GTF2IRD2Q86UP8 949 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 PLPP6Q8IY26 295 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 PJA1Q8NG27 643 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 OR4K1Q8NGD4 311 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 OR2T29Q8NH02 315 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 HSH2DQ96JZ2 352 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 LYSMD1Q96S90 227 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 KIF17Q9P2E2 1029 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 COQ6Q9Y2Z9 468 aa14.16□□□□□ -0.14
CNOT3-201ENST00000221232 GNG14A0A1W2PPG7 69 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 GRM6O15303 877 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 NUAK1O60285 661 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 SLC16A8O95907 504 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 PABPC1P11940 636 aaKnown RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 TYRP14679 529 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 ACPPP15309 386 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 CSF2RAP15509 400 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 XPAP23025 273 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms