RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 EXTL2Q9UBQ6 330 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 ASF1AQ9Y294 204 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 NOP16Q9Y3C1 178 aaKnown RBP10.2□□□□□ -0.78
VCL-201ENST00000211998 B4GALT5O43286 388 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 KIAA0513O60268 411 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 ANXA4P09525 319 aaPredicted RBP10.2□□□□□ -0.78
VCL-201ENST00000211998 PRPS2P11908 318 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 CLCN4P51793 760 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 CEACAM7Q14002 265 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 POU4F3Q15319 338 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 GRIK5Q16478 980 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 EEF1DP3Q658K8 133 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 ABHD15Q6UXT9 468 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 TMED4Q7Z7H5 227 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 ZC3HC1Q86WB0 502 aaKnown RBP10.2□□□□□ -0.78
VCL-201ENST00000211998 ANKFN1Q8N957 763 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 NXPE2Q96DL1 559 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 KLRG1Q96E93 195 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 SLC45A3Q96JT2 553 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 FCRL2Q96LA5 508 aaPredicted RBP10.2□□□□□ -0.78
VCL-201ENST00000211998 ATG10Q9H0Y0 220 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 TMEM185BQ9H7F4 350 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 SIRPGQ9P1W8 387 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 OR10H1Q9Y4A9 318 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 PCDHGB6Q9Y5F9 930 aa10.2□□□□□ -0.78
VCL-201ENST00000211998 CNTNAP1P78357 1384 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 C13orf42A0A1B0GVH6 325 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 CCL22O00626 93 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 SSX5O60225 188 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 STK16O75716 305 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 OAS1P00973 400 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 HERVK_113P63132 956 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 C2orf80Q0P641 193 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 SCGB2B2Q4G0G5 96 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 LCLAT1Q6UWP7 414 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 CAND1Q86VP6 1230 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 FOXRED2Q8IWF2 684 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 ERVK-6Q9BXR3 956 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 ZNF700Q9H0M5 742 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 RGCCQ9H4X1 137 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 FOLH1BQ9HBA9 442 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 SRRDQ9UH36 339 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 FARSAQ9Y285 508 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 SLC27A5Q9Y2P5 690 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 SMCO3A2RU48 225 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 AQP9O43315 295 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 SLC19A2O60779 497 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 MMP3P08254 477 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 CD247P20963 164 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 PPP3R1P63098 170 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 GAD2Q05329 585 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 UGCGQ16739 394 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 MFSD2AQ8NA29 543 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 GLIS1Q8NBF1 620 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 POGLUT1Q8NBL1 392 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 RIT1Q92963 219 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 METTL8Q9H825 291 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 MRPS33Q9Y291 106 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 RBM7Q9Y580 266 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 DLX3O60479 287 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 FARS2O95363 451 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 F7P08709 466 aaPredicted RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 ELFN1P0C7U0 828 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 DNASE1L1P49184 302 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 DGKQP52824 942 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 NRLP54845 237 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 BTN1A1Q13410 526 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 SSX2Q16385 188 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 TMEM44Q2T9K0 475 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 MPPE1Q53F39 396 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 ARL9Q6T311 187 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 RTL4Q6ZR62 310 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 ZNF627Q7L945 461 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 ZNF367Q7RTV3 350 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 OR2L5Q8NG80 312 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 MED30Q96HR3 178 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 GPR20Q99678 358 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 SSX3Q99909 188 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 RNF19AQ9NV58 838 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 NLKQ9UBE8 527 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 PCDHB1Q9Y5F3 818 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 EEF1E1O43324 174 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 BCAS1O75363 584 aaPredicted RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 ENDOUP21128 410 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 RPL19P84098 196 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 FAM151BQ6UXP7 276 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 JAZF1Q86VZ6 243 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 SPATA22Q8NHS9 363 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 RPLP0P6Q8NHW5 317 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 GPER1Q99527 375 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 PRMT8Q9NR22 394 aaPredicted RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 EIF2B3Q9NR50 452 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 THUMPD1Q9NXG2 353 aaKnown RBP10.19□□□□□ -0.78
VCL-201ENST00000211998 MS4A12Q9NXJ0 267 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 MGAT4CQ9UBM8 478 aa10.19□□□□□ -0.78
VCL-201ENST00000211998 BCL9LQ86UU0 1499 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 KERAO60938 352 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 PAGE1O75459 146 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms