RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 FER1L6-AS2Q96M78 137 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 AIFM3Q96NN9 605 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 DHRS9Q9BPW9 319 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 G6PC3Q9BUM1 346 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TLR7Q9NYK1 1049 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 CRISP3P54108 245 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GALNT12Q8IXK2 581 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 COG8Q96MW5 612 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ATG10Q9H0Y0 220 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GJD2Q9UKL4 321 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GPR34Q9UPC5 381 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PMF1-BGLAPU3KQ54 211 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SSU72P8A0A1W2PR75 194 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 C2orf78A6NCI8 922 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CSN2P05814 226 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 UQCRC1P31930 480 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SMSP52788 366 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TLE4Q04727 773 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZNF782Q6ZMW2 699 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 SLC26A11Q86WA9 606 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZBTB2Q8N680 514 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TOP6BLQ8N6T0 577 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PGAM5Q96HS1 289 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 FBXL20Q96IG2 436 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 URM1Q9BTM9 101 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 ACAT2Q9BWD1 397 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 LRRC10BA6NIK2 292 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TRDMT1O14717 391 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 PLEKHG4Q58EX7 1191 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ARHGAP11AQ6P4F7 1023 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 LRRTM4Q86VH4 590 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GALNT6Q8NCL4 622 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 OR5M3Q8NGP4 307 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EMC3Q9P0I2 261 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 NDRG3Q9UGV2 375 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 POMPQ9Y244 141 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 MID1O15344 667 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SNAPC5O75971 98 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 UBTFL6P0CB48 400 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 MATN1P21941 496 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GPX6P59796 221 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EEF1A1P68104 462 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 CCZ1BP86790 482 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CCZ1P86791 482 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 CSTF1Q05048 431 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 STK11Q15831 433 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SLC18A3Q16572 532 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SYT16Q17RD7 645 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EEF1A1P5Q5VTE0 462 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TMPRSS7Q7RTY8 843 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 DPY19L4Q7Z388 723 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZFPM1Q8IX07 1006 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CRYBG2Q8N1P7 616 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 MUC15Q8N387 334 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GPR152Q8TDT2 470 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CASKIN2Q8WXE0 1202 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 DGCR14Q96DF8 476 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 SH2D3AQ9BRG2 576 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SNRNP25Q9BV90 132 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 UNKLQ9H9P5 680 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 RABL2AQ9UBK7 228 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 FKBP7Q9Y680 259 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 RCBTB2O95199 551 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CLDN9O95484 217 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 INHAP05111 366 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 COL6A2P12110 1019 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZNF28P17035 718 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 XRCC1P18887 633 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 LHCGRP22888 699 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 MGAT1P26572 445 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TLE2Q04725 743 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GCNT7Q6ZNI0 430 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 C2orf73Q8N5S3 287 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 FAIMQ9NVQ4 179 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TAGLN3Q9UI15 199 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 A0A1W2PQC6 194 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 GABARAPH6UMI1 98 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 GABARAPO95166 117 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 OLFM2O95897 454 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 UGT2B10P36537 528 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 AKR1D1P51857 326 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 TEKQ02763 1124 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 MPP7Q5T2T1 576 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 TPGS2Q68CL5 300 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 MARCH10Q8NA82 808 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 NR4A3Q92570 626 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 RGMAQ96B86 450 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 DPH3P1Q9H4G8 78 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 CUTCQ9NTM9 273 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 RBM12Q9NTZ6 932 aaKnown RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 ZNF282Q9UDV7 671 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 SRPRAP08240 638 aaKnown RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 CXCL8P10145 99 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 VSX2P58304 361 aaPredicted RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 GNG2P59768 71 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 RPL38P63173 70 aaKnown RBP3.36□□□□□ -1.87
NEB-201ENST00000172853 LMAN2Q12907 356 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 PON3Q15166 354 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 KDM4DQ6B0I6 523 aa3.36□□□□□ -1.87
NEB-201ENST00000172853 SLC46A3Q7Z3Q1 461 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms