RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GXYLT2A0PJZ3 443 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 F8VP50 259 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 OR7A10O76100 309 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 FARS2O95363 451 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CTDNEP1O95476 244 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TPH1P17752 444 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CSTF2P33240 577 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MAGEA8P43361 318 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PITPNBP48739 271 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 OR2B6P58173 313 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PCK2Q16822 640 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZSWIM9Q86XI8 627 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 KLHDC8BQ8IXV7 354 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 DNAJC22Q8N4W6 341 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 EFCAB3Q8N7B9 438 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CCDC71LQ8N9Z2 235 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 OR2L2Q8NH16 312 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MCMBPQ9BTE3 642 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 GBA2Q9HCG7 927 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 A0A1W2PP18 115 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MATN3O15232 486 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MAFO75444 373 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SLITRK5O94991 958 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ARF4P18085 180 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CPT2P23786 658 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CD40LGP29965 261 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ECI1P42126 302 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PPP3CAQ08209 521 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SLC43A2Q8N370 569 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MS4A15Q8N5U1 240 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM145Q8NBT3 493 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SMG8Q8ND04 991 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 POLR2J2Q9GZM3 115 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SRA1Q9HD15 236 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 NOX1Q9Y5S8 564 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MST1RQ04912 1400 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 DCLK1O15075 740 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 FOSL1P15407 271 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 LAG3P18627 525 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 HDCP19113 662 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 OXTRP30559 389 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ARL3P36405 182 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 DNAJB13P59910 316 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 PET117Q6UWS5 81 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF367Q7RTV3 350 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TM9SF4Q92544 642 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 C5orf34Q96MH7 638 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF350Q9GZX5 532 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SEMA6AQ9H2E6 1030 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 DOCK3Q8IZD9 2030 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF142P52746 1687 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SLC15A5A6NIM6 579 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 RAD51DO75771 328 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ANXA4P09525 319 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 COL6A1P12109 1028 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 EPHA3P29320 983 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 POLR2HP52434 150 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CLVS2Q5SYC1 327 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CELF3Q5SZQ8 465 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF782Q6ZMW2 699 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TMPRSS11BQ86T26 416 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SHKBP1Q8TBC3 707 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TCTEX1D2Q8WW35 142 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 HMX1Q9NP08 348 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TDP1Q9NUW8 608 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 MRPS23Q9Y3D9 190 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 FBXO7Q9Y3I1 522 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 YLPM1P49750 1951 aaKnown RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 C5orf51A6NDU8 294 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 SOBPA7XYQ1 873 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ARPC2O15144 300 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 INMTO95050 263 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 VIPP01282 170 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 CTSHP09668 335 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 S1PR1P21453 382 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 GRM5P41594 1212 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 RHBDL3P58872 404 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 FMO1Q01740 532 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF630Q2M218 657 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 TPGS2Q68CL5 300 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF613Q6PF04 617 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 COQ8AQ8NI60 647 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 ZBED3Q96IU2 234 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-201ENST00000011700 GPRC5BQ9NZH0 403 aa5.94□□□□□ -1.46
VPS13D-201ENST00000011700 A0A087WWV3 80 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 P2RX6O15547 441 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 SNCGO76070 127 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 TFPIP10646 304 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 HERV-K104P61576 105 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 ITGA7Q13683 1181 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 EXOC3L2Q2M3D2 409 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 PRPF38BQ5VTL8 546 aaKnown RBP5.93□□□□□ -1.46
VPS13D-201ENST00000011700 ZC3H14Q6PJT7 736 aaKnown RBP5.93□□□□□ -1.46
VPS13D-201ENST00000011700 VSIG10LQ86VR7 867 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 DEFB106AQ8N104 65 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 OR10H4Q8NGA5 316 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 GPR20Q99678 358 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 DNAJC5Q9H3Z4 198 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 ELP3Q9H9T3 547 aa5.93□□□□□ -1.46
VPS13D-201ENST00000011700 ZGRF1Q86YA3 2104 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms