RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 DLG1Q12959 904 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 TSTA3Q13630 321 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-231ENST00000640499 BMPR2Q13873 1038 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 BROXQ5VW32 411 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ZNF425Q6IV72 752 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 LCN10Q6JVE6 187 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ESX1Q8N693 406 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 IL22RA1Q8N6P7 574 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 SNRNP27Q8WVK2 155 aaKnown RBP25.62■■□□□ 1.69
VEGFA-231ENST00000640499 SLC44A1Q8WWI5 657 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 TSPAN17Q96FV3 270 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ZNF285Q96NJ3 590 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 SGPP1Q9BX95 441 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 DERL2Q9GZP9 239 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 EPB41L4BQ9H329 900 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ANKZF1Q9H8Y5 726 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 FANCEQ9HB96 536 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 ABCF3Q9NUQ8 709 aa25.62■■□□□ 1.69
VEGFA-231ENST00000640499 INTS7Q9NVH2 962 aaKnown RBP25.62■■□□□ 1.69
VEGFA-231ENST00000640499 UTP6Q9NYH9 597 aaKnown RBP25.62■■□□□ 1.69
VEGFA-231ENST00000640499 K7ENP7 123 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 CCDC166P0CW27 439 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 CD1DP15813 335 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 CMPK1P30085 196 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 GCGRP47871 477 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 ATP1A2P50993 1020 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 TMPRSS3P57727 454 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 CXADRP78310 365 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 SLMAPQ14BN4 828 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 TSNQ15631 228 aaKnown RBP25.61■■□□□ 1.69
VEGFA-231ENST00000640499 MROH9Q5TGP6 573 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 INO80CQ6PI98 192 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-231ENST00000640499 ZNF517Q6ZMY9 492 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-231ENST00000640499 PAQR7Q86WK9 346 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 OR56A3Q8NH54 315 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 FBXL8Q96CD0 374 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 MRPS30Q9NP92 439 aaKnown RBP25.61■■□□□ 1.69
VEGFA-231ENST00000640499 ENAMQ9NRM1 1142 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 CUEDC1Q9NWM3 386 aaPredicted RBP25.61■■□□□ 1.69
VEGFA-231ENST00000640499 ARL15Q9NXU5 204 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 IL17BQ9UHF5 180 aa25.61■■□□□ 1.69
VEGFA-231ENST00000640499 FER1L5A0AVI2 2057 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 ZNF749O43361 778 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 CPNE3O75131 537 aaKnown RBP25.6■■□□□ 1.69
VEGFA-231ENST00000640499 GUCA1CO95843 209 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 ENO2P09104 434 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-231ENST00000640499 HIST1H2AGP0C0S8 130 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-231ENST00000640499 HIST1H2ADP20671 130 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 KCNC1P48547 511 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 AP1S2P56377 157 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 VAC14Q08AM6 782 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 NAE1Q13564 534 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 FRMPD2BQ6IN97 320 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 FAM199XQ6PEV8 388 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-231ENST00000640499 CCDC81Q6ZN84 652 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 PTERQ96BW5 349 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 HIST1H2AHQ96KK5 128 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 LRFN5Q96NI6 719 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 OR4K3Q96R72 315 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 RUFY1Q96T51 708 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 HIST1H2AJQ99878 128 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 PLCD4Q9BRC7 762 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 H2AFJQ9BTM1 129 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 LHX9Q9NQ69 397 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 PCMTD2Q9NV79 361 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 CTNNAL1Q9UBT7 734 aa25.6■■□□□ 1.69
VEGFA-231ENST00000640499 SEC16AO15027 2179 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 LOC105369274A0A096LPK9 316 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 LOC102723532A0A0G2JNH3 316 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 E7EQ34 232 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 OR2B3O76000 313 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 UCNP55089 124 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 OR4D1Q15615 310 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 ARHGAP40Q5TG30 622 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 ZNF385CQ66K41 422 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-231ENST00000640499 RNF44Q7L0R7 432 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 OR4N4Q8N0Y3 316 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 EIF1ADQ8N9N8 165 aaKnown RBP25.59■■□□□ 1.69
VEGFA-231ENST00000640499 PYCR2Q96C36 320 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 ACTR5Q9H9F9 607 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-231ENST00000640499 CCDC177Q9NQR7 707 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-231ENST00000640499 CROTQ9UKG9 612 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 PADI1Q9ULC6 663 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 OARD1Q9Y530 152 aa25.59■■□□□ 1.69
VEGFA-231ENST00000640499 RIPK2O43353 540 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 NPPBP16860 134 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 GCAP28676 217 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 PMS2P54278 862 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 ABATP80404 500 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 CSHL1Q14406 222 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 UAP1Q16222 522 aaPredicted RBP25.58■■□□□ 1.69
VEGFA-231ENST00000640499 TRMT10CQ7L0Y3 403 aaKnown RBP25.58■■□□□ 1.69
VEGFA-231ENST00000640499 DSELQ8IZU8 1212 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 ZNF655Q8N720 491 aaPredicted RBP25.58■■□□□ 1.69
VEGFA-231ENST00000640499 CT55Q8WUE5 264 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 DCAKDQ8WVC6 231 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 MED8Q96G25 268 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 TRIM54Q9BYV2 358 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 IGSF5Q9NSI5 407 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 STARD5Q9NSY2 213 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms