RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 RPUSD1Q9UJJ7 312 aaKnown RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 RNF112Q9ULX5 631 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 CRYL1Q9Y2S2 319 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ALMS1Q8TCU4 4167 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 MYH11P35749 1972 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 SEC16AO15027 2179 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 LOC102723996A0A087X1L8 192 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 LRRC14BA6NHZ5 514 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 VWC2LB2RUY7 222 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 PSMD11O00231 422 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 EIF4EBP3O60516 100 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 HCN1O60741 890 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 CNOT3O75175 753 aaKnown RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 TRUB2O95900 331 aaKnown RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 UQCRHP07919 91 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 COX6A1P12074 109 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 CTSSP25774 331 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 TLX1P31314 330 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 AGFG1P52594 562 aaKnown RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 SCAND1P57086 179 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 DPTQ07507 201 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 BLMHQ13867 455 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 SIX1Q15475 284 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 CCDC38Q502W7 563 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 FAM69BQ5VUD6 431 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 SAXO2Q658L1 398 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 BHLHA9Q7RTU4 235 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 MTDHQ86UE4 582 aaKnown RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 TRIM48Q8IWZ4 208 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ARHGEF39Q8N4T4 335 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ATP6V0D2Q8N8Y2 350 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ZDHHC22Q8N966 263 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 PLA2G15Q8NCC3 412 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 TBC1D20Q96BZ9 403 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 UBXN10Q96LJ8 280 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 TUBB6Q9BUF5 446 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ZDHHC11Q9H8X9 412 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ZNF160Q9HCG1 818 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 SMYD2Q9NRG4 433 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 RBAKQ9NYW8 714 aaPredicted RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 GPRC5BQ9NZH0 403 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 DHCR7Q9UBM7 475 aaKnown RBP3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ACAD8Q9UKU7 415 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 EXOC7Q9UPT5 735 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 TMEM98Q9Y2Y6 226 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 ST14Q9Y5Y6 855 aa3.25□□□□□ -1.89
CCDC7-213ENST00000639290 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 DOCK4Q8N1I0 1966 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 FAM234BA2RU67 622 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 GOLGA6L4A6NEF3 574 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 GOLGA6L9A6NEM1 432 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 AHRRA9YTQ3 701 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 H3BML4 177 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 J3QW42 95 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 EPHB6O15197 1021 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 SMAD9O15198 467 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ZNF749O43361 778 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 H2AFYO75367 372 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ERN1O75460 977 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 PRKRAO75569 313 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 UBOX5O94941 541 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 LCA5LO95447 670 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 EPPINO95925 133 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 IGHDP01880 384 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 SCG5P05408 212 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 APEHP13798 732 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 RAD52P43351 418 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 SLC6A12P48065 614 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ARSFP54793 590 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ZBED6P86452 979 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 POLD3Q15054 466 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 SF1Q15637 639 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 CLEC16AQ2KHT3 1053 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 SLC35F1Q5T1Q4 408 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 GTF2IRD2BQ6EKJ0 949 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 GTF2IRD2Q86UP8 949 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 CHSY1Q86X52 802 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ZC3H7AQ8IWR0 971 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 GRAMD1CQ8IYS0 662 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 Q8NFD4 153 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 OR2AP1Q8NGE2 309 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 UCN3Q969E3 161 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 C1GALT1C1Q96EU7 318 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ZNF641Q96N77 438 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 BTBD9Q96Q07 612 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 SFXN3Q9BWM7 321 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 RBM24Q9BX46 236 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 GTPBP4Q9BZE4 634 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 MTMR12Q9C0I1 747 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 OR10A4Q9H209 315 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ZNF703Q9H7S9 590 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 CNGB3Q9NQW8 809 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 PNPLA3Q9NST1 481 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 DDX28Q9NUL7 540 aaKnown RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 PDP1Q9P0J1 537 aaPredicted RBP3.24□□□□□ -1.89
CCDC7-213ENST00000639290 HERC1Q15751 4861 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 A0A087WV62 115 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 A0A1W2PQ67 120 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 PRAMEF27A3QJZ7 478 aa3.24□□□□□ -1.89
CCDC7-213ENST00000639290 ACOT7O00154 380 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms