RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PREBQ9HCU5 417 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 BCAP29Q9UHQ4 241 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 KCNE2Q9Y6J6 123 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 ARHGEF17Q96PE2 2063 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 TMEM265A0A087WTH1 108 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 RNGTTO60942 597 aaKnown RBP12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 ETHE1O95571 254 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 PRPS2P11908 318 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 HSD3B1P14060 373 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 PCSK2P16519 638 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 HOXB9P17482 250 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 HSD3B2P26439 372 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 PPP2CBP62714 309 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 PPP2CAP67775 309 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 SPANXN4Q5MJ08 99 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 CACHD1Q5VU97 1274 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 HID1Q8IV36 788 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 SYTL1Q8IYJ3 562 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 PQLC1Q8N2U9 271 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 OR5K2Q8NHB8 316 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 DNAJB14Q8TBM8 379 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 ZUFSPQ96AP4 578 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 SLCO4A1Q96BD0 722 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 EHD1Q9H4M9 534 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 CD93Q9NPY3 652 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 PHPT1Q9NRX4 125 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 RIMS3Q9UJD0 308 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 ASF1AQ9Y294 204 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 PCDHGA11Q9Y5H2 935 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 LRP4O75096 1905 aa12.11□□□□□ -0.47
CACNA1A-219ENST00000635917 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 MBTPS2O43462 519 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 BAG2O95816 211 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 IL6P05231 212 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 PGRP06401 933 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 ATXN3P54252 364 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 PNLIPRP1P54315 467 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 GRSF1Q12849 480 aaKnown RBP eCLIP12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 FAM174BQ3ZCQ3 159 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 HABP4Q5JVS0 413 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 CATSPEREQ5SY80 951 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 IRAK1BP1Q5VVH5 260 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 ATG9BQ674R7 924 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 DCUN1D3Q8IWE4 304 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 LAS2Q8IYD9 372 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 PHC3Q8NDX5 983 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 SLC13A3Q8WWT9 602 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 DNAJC9Q8WXX5 260 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 RAD51AP1Q96B01 352 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 TESCQ96BS2 214 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 SIPA1Q96FS4 1042 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 EGLN2Q96KS0 407 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 NRTNQ99748 197 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 TIMM29Q9BSF4 260 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 DPY30Q9C005 99 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 BTBD1Q9H0C5 482 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 SERHLQ9NQF3 203 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 C6orf203Q9P0P8 240 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 VPS29Q9UBQ0 182 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 PPT2Q9UMR5 302 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 WDR37Q9Y2I8 494 aa12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 GOLGA4Q13439 2230 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-219ENST00000635917 MAGEB17A8MXT2 336 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 CLGNO14967 610 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 GLULP15104 373 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 ACADSP16219 412 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 ATP6V1B2P21281 511 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 ATP6V1C1P21283 382 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 KELP23276 732 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 PTPN6P29350 595 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 GSK3BP49841 420 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 EEFSECP57772 596 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 C21orf58P58505 322 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 RAE1P78406 368 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 BNIP2Q12982 314 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 SGCGQ13326 291 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 PWP1Q13610 501 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 ARHGAP19Q14CB8 494 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 MLF2Q15773 248 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 PYCR3Q53H96 274 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 LCN8Q6JVE9 175 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 NOXRED1Q6NXP6 359 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 TICAM1Q8IUC6 712 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 TMEM126BQ8IUX1 230 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 MSRB3Q8IXL7 192 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 SETD7Q8WTS6 366 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 NAF1Q96HR8 494 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 APOLD1Q96LR9 279 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 IL17FQ96PD4 163 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 MTERF1Q99551 399 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 CGREF1Q99674 301 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 APOOQ9BUR5 198 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 SPNS1Q9H2V7 528 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 RMI1Q9H9A7 625 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 GEMIN8Q9NWZ8 242 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 VAPAQ9P0L0 249 aa12.09□□□□□ -0.47
CACNA1A-219ENST00000635917 ACTR3BQ9P1U1 418 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms