RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 TSTA3Q13630 321 aaPredicted RBP18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 IL11RAQ14626 422 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 ACAP2Q15057 778 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 TBC1D25Q3MII6 688 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 TMTC4Q5T4D3 741 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 CDHR3Q6ZTQ4 885 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 FRA10AC1Q70Z53 315 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 KLHDC8AQ8IYD2 350 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 DNAJC22Q8N4W6 341 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 ZNF501Q96CX3 271 aaPredicted RBP18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 CABS1Q96KC9 395 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 PCBD2Q9H0N5 130 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 CCDC86Q9H6F5 360 aaKnown RBP18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 SLC6A20Q9NP91 592 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 THSD1Q9NS62 852 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 RNF112Q9ULX5 631 aa18.66■□□□□ 0.58
CROCCP4-202ENST00000633627 URB1O60287 2271 aaKnown RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 CCDC151A5D8V7 595 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 POLR1CO15160 346 aaPredicted RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 TAPBPO15533 448 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 CTIFO43310 598 aaKnown RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 HCRTR1O43613 425 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 MTHFD2P13995 350 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 NPPBP16860 134 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 CCND1P24385 295 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 GLRBP48167 497 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 TUBB3Q13509 450 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 GPR19Q15760 415 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 TECRLQ5HYJ1 363 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 DCAF12Q5T6F0 453 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 PRAMEF13Q5VWM6 474 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 ZNF425Q6IV72 752 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 CAPN13Q6MZZ7 669 aaPredicted RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 SH2D5Q6ZV89 423 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 BPHLQ86WA6 291 aaPredicted RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 PDPRQ8NCN5 879 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 ACMSDQ8TDX5 336 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 PYCR2Q96C36 320 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 MED8Q96G25 268 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 TEFMQ96QE5 360 aaKnown RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 OR4K3Q96R72 315 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 CTRCQ99895 268 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 EGFL8Q99944 293 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 DPH7Q9BTV6 452 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 TMEM109Q9BVC6 243 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 ASPSCR1Q9BZE9 553 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 ROPN1BQ9BZX4 212 aaPredicted RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 ROPN1Q9HAT0 212 aaPredicted RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 MRPS30Q9NP92 439 aaKnown RBP18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 FOXJ2Q9P0K8 574 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 ACSL6Q9UKU0 697 aa18.65■□□□□ 0.58
CROCCP4-202ENST00000633627 SDK2Q58EX2 2172 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 A0A1W2PPM1 405 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 OR2A25A4D2G3 310 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 SMIM23A6NLE4 172 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 MAP3K7O43318 606 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 CCNDBP1O95273 360 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 GGT5P36269 586 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 SLC6A12P48065 614 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 TSNAXIP1Q2TAA8 658 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 C18orf21Q32NC0 220 aaPredicted RBP18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 PTCHD3Q3KNS1 767 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 THEMIS2Q5TEJ8 643 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 TMEM164Q5U3C3 297 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 SULT1C3Q6IMI6 304 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 KLC3Q6P597 504 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 CYB5D1Q6P9G0 228 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 LCTLQ6UWM7 567 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 CEACAM20Q6UY09 585 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 IQCKQ8N0W5 287 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 TCAIMQ8N3R3 496 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 ZPBPQ9BS86 351 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 SPRY4Q9C004 299 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 ABCF3Q9NUQ8 709 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 NUDT4Q9NZJ9 180 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 ANKMY1Q9P2S6 941 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 PTBP2Q9UKA9 531 aaKnown RBP18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 RARRES3Q9UL19 164 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 SH2B3Q9UQQ2 575 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 PLAAQ9Y263 795 aa18.64■□□□□ 0.57
CROCCP4-202ENST00000633627 NCF1BA6NI72 391 aaPredicted RBP18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 NCF1CA8MVU1 366 aaPredicted RBP18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 FOXO6A8MYZ6 492 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 UBXN8O00124 270 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 NRP2O60462 931 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 CTSVO60911 334 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 MT-ND3P03897 115 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 NCF1P14598 390 aaPredicted RBP18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 NAA25Q14CX7 972 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 PAQR7Q86WK9 346 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 RIBC1Q8N443 379 aaPredicted RBP18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 OR8K5Q8NH50 307 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 FGF11Q92914 225 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 ALKBH8Q96BT7 664 aaKnown RBP18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 FCRL4Q96PJ5 515 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 PLCD4Q9BRC7 762 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 TMEM79Q9BSE2 394 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 HAUS8Q9BT25 410 aa18.63■□□□□ 0.57
CROCCP4-202ENST00000633627 PCMTD2Q9NV79 361 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms