RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 DBF4BQ8NFT6 615 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 TM9SF4Q92544 642 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 P2RX5Q93086 422 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 BSCL2Q96G97 398 aaPredicted RBP3.73□□□□□ -1.81
CDR1-202ENST00000625883 NSL1Q96IY1 281 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 LMLNQ96KR4 655 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 SHARPINQ9H0F6 387 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 FAM207AQ9NSI2 230 aaPredicted RBP3.73□□□□□ -1.81
CDR1-202ENST00000625883 ECHDC1Q9NTX5 307 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 ARMCX3Q9UH62 379 aaPredicted RBP3.73□□□□□ -1.81
CDR1-202ENST00000625883 LIPT1Q9Y234 373 aa3.73□□□□□ -1.81
CDR1-202ENST00000625883 FAM172BPA6NC97 362 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 OOEPA6NGQ2 149 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 BAG3O95817 575 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 PLGP00747 810 aaPredicted RBP3.72□□□□□ -1.81
CDR1-202ENST00000625883 RLN1P04808 185 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 SERPING1P05155 500 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 MYL6BP14649 208 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 CA6P23280 308 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 CDX1P47902 265 aaPredicted RBP3.72□□□□□ -1.81
CDR1-202ENST00000625883 LINC01547P58512 204 aaPredicted RBP3.72□□□□□ -1.81
CDR1-202ENST00000625883 GPR17Q13304 367 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 SLC25A53Q5H9E4 307 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 OR4A47Q6IF82 309 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 LINC00696Q6ZRV3 163 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 MARK2Q7KZI7 788 aaKnown RBP3.72□□□□□ -1.81
CDR1-202ENST00000625883 CCDC170Q8IYT3 715 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 NDUFAF2Q8N183 169 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 STPG4Q8N801 248 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 SEPT1Q8WYJ6 367 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 PTP4A1Q93096 173 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 PYCR2Q96C36 320 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 MAP3K3Q99759 626 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 DNAI2Q9GZS0 605 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 ZMYND12Q9H0C1 365 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 SNX25Q9H3E2 840 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 ZNF334Q9HCZ1 680 aaPredicted RBP3.72□□□□□ -1.81
CDR1-202ENST00000625883 SIX2Q9NPC8 291 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 PHPT1Q9NRX4 125 aaPredicted RBP3.72□□□□□ -1.81
CDR1-202ENST00000625883 ADPRHL2Q9NX46 363 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 P4HTMQ9NXG6 502 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 WWOXQ9NZC7 414 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 SEPT10Q9P0V9 454 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
CDR1-202ENST00000625883 IGHV4-61A0A0C4DH41 118 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 O00370 1275 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 ZNF197O14709 1029 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 FLRT2O43155 660 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 LMX1BO60663 402 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 FMO6PO60774 539 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 SLC22A3O75751 556 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 NGFP01138 241 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 IGHV4-59P01825 116 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 GP1BBP13224 206 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 EEF2P13639 858 aaKnown RBP3.71□□□□□ -1.82
CDR1-202ENST00000625883 CEACAM8P31997 349 aaPredicted RBP3.71□□□□□ -1.82
CDR1-202ENST00000625883 TIMP3P35625 211 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 SQLEQ14534 574 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 TAF13Q15543 124 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 ZNF674Q2M3X9 581 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 SLC35D3Q5M8T2 416 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 SLC10A5Q5PT55 438 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 LYSMD4Q5XG99 296 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 FAM166AQ6J272 317 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 ZNF449Q6P9G9 518 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 PRSS55Q6UWB4 352 aaPredicted RBP3.71□□□□□ -1.82
CDR1-202ENST00000625883 SLC26A9Q7LBE3 791 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 PIGZQ86VD9 579 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 SNX32Q86XE0 403 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 SYCP3Q8IZU3 236 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 NUP93Q8N1F7 819 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 KLHDC1Q8N7A1 406 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 KBTBD8Q8NFY9 601 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 GRK7Q8WTQ7 553 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 ZNF524Q96C55 264 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 FUT8Q9BYC5 575 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 RSPH9Q9H1X1 276 aaPredicted RBP3.71□□□□□ -1.82
CDR1-202ENST00000625883 CPVLQ9H3G5 476 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 TUFT1Q9NNX1 390 aa3.71□□□□□ -1.82
CDR1-202ENST00000625883 SCN5AQ14524 2016 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 KRTAP29-1A8MX34 341 aaPredicted RBP3.7□□□□□ -1.82
CDR1-202ENST00000625883 F8VVB4 439 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 F8VWA3 439 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 IGLV2-11P01706 119 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 APOHP02749 345 aaPredicted RBP3.7□□□□□ -1.82
CDR1-202ENST00000625883 ANKRD34CP0C6C1 535 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 STAG3L1P0CL83 205 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 DARSP14868 501 aaKnown RBP3.7□□□□□ -1.82
CDR1-202ENST00000625883 EPORP19235 508 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 CSTF2P33240 577 aaKnown RBP eCLIP3.7□□□□□ -1.82
CDR1-202ENST00000625883 C17orf67Q0P5P2 114 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 STPG1Q5TH74 334 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 RUSC1-AS1Q66K80 236 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 C18orf65Q6ZTR6 163 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 AMIGO1Q86WK6 493 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 ZNF713Q8N859 430 aaPredicted RBP3.7□□□□□ -1.82
CDR1-202ENST00000625883 NOA1Q8NC60 698 aaKnown RBP3.7□□□□□ -1.82
CDR1-202ENST00000625883 TMEM143Q96AN5 459 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 GDAP1L1Q96MZ0 367 aa3.7□□□□□ -1.82
CDR1-202ENST00000625883 NODALQ96S42 347 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms