RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 XKR6Q5GH73 641 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 FAM219BQ5XKK7 198 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 CLEC6AQ6EIG7 209 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 WDR75Q8IWA0 830 aaKnown RBP17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 ADGRF3Q8IZF5 1079 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 KIRREL3Q8IZU9 778 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 CDYL2Q8N8U2 506 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 OR4C6Q8NH72 309 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 SLC38A3Q99624 504 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 TBC1D10AQ9BXI6 508 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 UCK1Q9HA47 277 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 SPHK1Q9NYA1 384 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 RNF11Q9Y3C5 154 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 HEATR5BQ9P2D3 2071 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 LAMA1P25391 3075 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 FAM221BA6H8Z2 402 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 ISM1B1AKI9 464 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 PEBP1P30086 187 aaKnown RBP17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 FOXA1P55317 472 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 IFT88Q13099 833 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 TMPRSS11BQ86T26 416 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 C17orf64Q86WR6 236 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 CLYBLQ8N0X4 340 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 SLC5A11Q8WWX8 675 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 IRF2BPLQ9H1B7 796 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 RNF215Q9Y6U7 377 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 DNAH14Q0VDD8 3507 aa17.19■□□□□ 0.34
PTCHD3-202ENST00000622555 LNP1A1A4G5 178 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 PIPSLA2A3N6 862 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 GSAPA4D1B5 854 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 LILRA5A6NI73 299 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 PCDHGA12O60330 932 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 PRAMEF4O60810 478 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 ENO1P06733 434 aaKnown RBP17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 CAPN1P07384 714 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 FGF4P08620 206 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 HGFP14210 728 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 POLR2CP19387 275 aaPredicted RBP17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 HK2P52789 917 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 PRAMEF9Q5VWM5 478 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 KANK2Q63ZY3 851 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 ICE2Q659A1 982 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 EID2Q8N6I1 236 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 OR2A1Q8NGT9 310 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 RFWD2Q8NHY2 731 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 FAR2Q96K12 515 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 FAM86C1Q9NVL1 165 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 LRIT1Q9P2V4 623 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 TRPS1Q9UHF7 1281 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 DCTN4Q9UJW0 460 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 TIMM22Q9Y584 194 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 USH1CQ9Y6N9 552 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 SLCO1B7G3V0H7 640 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 MATN2O00339 956 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 SIGLEC6O43699 453 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 PRICKLE3O43900 615 aaPredicted RBP17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 ZNF806P0C7X5 589 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 UROSP10746 265 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 CDH1P12830 882 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 MYF5P13349 255 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 TYRP1P17643 537 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 SERPINB3P29508 390 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 HMOX2P30519 316 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 DOC2AQ14183 400 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 KIR2DS3Q14952 304 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 SF3A2Q15428 464 aaKnown RBP17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 PDCD2Q16342 344 aaPredicted RBP17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 LACTB2Q53H82 288 aaPredicted RBP17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 CATSPEREQ5SY80 951 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 SLCO4C1Q6ZQN7 724 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 SPATA21Q7Z572 469 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 OOSP2Q86WS3 158 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 L3MBTL4Q8NA19 623 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 METTL6Q8TCB7 284 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 SLC22A18Q96BI1 424 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 HRASLS2Q9NWW9 162 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 KLHL14Q9P2G3 628 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 VTI1BQ9UEU0 232 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 PADI4Q9UM07 663 aa17.18■□□□□ 0.34
PTCHD3-202ENST00000622555 A0A0G2JND7 137 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 ANKRD65E5RJM6 399 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 FFAR3O14843 346 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 HDAC3O15379 428 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 GPR42O15529 346 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 NUDT21O43809 227 aaKnown RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 UGDHO60701 494 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 SKAP2O75563 359 aaPredicted RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 WFS1O76024 890 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 KIAA0754O94854 1291 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 UBXN7O94888 489 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 CCNDBP1O95273 360 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 CHEK2O96017 543 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 AMD1P17707 334 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 VARSP26640 1264 aaKnown RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 PPM1FP49593 454 aaPredicted RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 AQP5P55064 265 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 YBX1P67809 324 aaKnown RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 PRDX1Q06830 199 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms