RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 TRAPPC5Q8IUR0 188 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 CDYL2Q8N8U2 506 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 DCBLD1Q8N8Z6 715 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 FAM13CQ8NE31 585 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 MCOLN3Q8TDD5 553 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 CNTNAP3BQ96NU0 1288 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 TRIM54Q9BYV2 358 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 CNTNAP3Q9BZ76 1288 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 OR52A5Q9H2C5 316 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 TMEM9BQ9NQ34 198 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 TMEM98Q9Y2Y6 226 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 CACNA1EQ15878 2313 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 MAP1BP46821 2468 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 RNGTTO60942 597 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 WDR47O94967 919 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 C1orf105O95561 183 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 PAK4O96013 591 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 HIST1H2AGP0C0S8 130 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 THRAP10827 490 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 EPB42P16452 691 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 HIST1H2ADP20671 130 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 GPX3P22352 226 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 IGFALSP35858 605 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 DPP6P42658 865 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 RAP1GDS1P52306 607 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 ABRQ12979 859 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 RPA4Q13156 261 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 GTF2H3Q13889 308 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 E2F2Q14209 437 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 INPP5AQ14642 412 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 CCSMST1Q4G0I0 132 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 DNAL1Q4LDG9 190 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 C4orf46Q504U0 113 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 KIAA1324Q6UXG2 1013 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 L3MBTL4Q8NA19 623 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 USP7Q93009 1102 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 SIPA1Q96FS4 1042 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 HIST1H2AHQ96KK5 128 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 HIST1H2AJQ99878 128 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 H2AFJQ9BTM1 129 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 SLC17A9Q9BYT1 436 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 SDR39U1Q9NRG7 319 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 GIMAP2Q9UG22 337 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 SLC23A2Q9UGH3 650 aa12.04□□□□□ -0.48
TNFAIP3-211ENST00000621150 LOC100653049A0A140TA62 436 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 A8MUI8 341 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 H3BM21 787 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 KRT34O76011 436 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 CATP04040 527 aaKnown RBP12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 FUCA1P04066 466 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 ENGP17813 658 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 LBPP18428 481 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 ITGAXP20702 1163 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 IMPA1P29218 277 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 PBLDP30039 288 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 HOXD12P35452 270 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 CCNG1P51959 295 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 PPP2CBP62714 309 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 PPP2CAP67775 309 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 DMPKQ09013 629 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 NFE2L1Q14494 772 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 TTC31Q49AM3 519 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 CRTC3Q6UUV7 619 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 TRIM46Q7Z4K8 759 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 MILR1Q7Z6M3 343 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 SNX32Q86XE0 403 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 FUNDC1Q8IVP5 155 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 GALNT12Q8IXK2 581 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 DDIASQ8IXT1 998 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 CFAP206Q8IYR0 622 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 OR56A3Q8NH54 315 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 OR14C36Q8NHC7 312 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 METTL6Q8TCB7 284 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 SKA2Q8WVK7 121 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 SCARF2Q96GP6 870 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 CCDC138Q96M89 665 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 SLC29A3Q9BZD2 475 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 ZDHHC5Q9C0B5 715 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 WDR26Q9H7D7 661 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 SLC52A3Q9NQ40 469 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 ITM2CQ9NQX7 267 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 STOX2Q9P2F5 926 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 PPT2Q9UMR5 302 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 GPR45Q9Y5Y3 372 aa12.03□□□□□ -0.48
TNFAIP3-211ENST00000621150 NUMA1Q14980 2115 aa12.02□□□□□ -0.48
TNFAIP3-211ENST00000621150 MEI4A8MW99 385 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 NPIPB8E9PQR5 432 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 KATNA1O75449 491 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 CHEK2O96017 543 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 IGLV3-19P01714 112 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 HOXC4P09017 264 aaPredicted RBP12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 MYCLP1P12525 358 aaPredicted RBP12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 HGFP14210 728 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 GNALP38405 381 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 BDKRB1P46663 353 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 SLC25A3Q00325 362 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 GRIK2Q13002 908 aa12.02□□□□□ -0.49
TNFAIP3-211ENST00000621150 CYLC2Q14093 348 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms