RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 AARSD1Q9BTE6 412 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 YIPF2Q9BWQ6 316 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 KAT8Q9H7Z6 458 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 RMND5AQ9H871 391 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 MOV10Q9HCE1 1003 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 SACM1LQ9NTJ5 587 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 TDP1Q9NUW8 608 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 SPATA7Q9P0W8 599 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 KLHL3Q9UH77 587 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 EIF2B4Q9UI10 523 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 ZMYM5Q9UJ78 669 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 KCTD3Q9Y597 815 aa6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 TNPO3Q9Y5L0 923 aaKnown RBP6.82□□□□□ -1.32
SRGAP3-213ENST00000618999 H3BNC9 293 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CXCR6O00574 342 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 DLGAP1O14490 977 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF197O14709 1029 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 STX7O15400 261 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 TNFRSF21O75509 655 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PRKD3O94806 890 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 HOXB6P17509 224 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ADRA1AP35348 466 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 IDUAP35475 653 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 DGKQP52824 942 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 IST1P53990 364 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 NPTX1Q15818 432 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 AFMIDQ63HM1 303 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 C8orf82Q6P1X6 216 aaPredicted RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CYP20A1Q6UW02 462 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 GLT6D1Q7Z4J2 308 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 DTWD1Q8N5C7 304 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC13A3Q8WWT9 602 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 EFHD2Q96C19 240 aaPredicted RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 LINGO1Q96FE5 620 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 NSMCE3Q96MG7 304 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 FEM1AQ9BSK4 669 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CEP44Q9C0F1 390 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 POPDC3Q9HBV1 291 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CCL26Q9Y258 94 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PKP3Q9Y446 797 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PCDHGB6Q9Y5F9 930 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 MAGED1Q9Y5V3 778 aaPredicted RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ARL5AQ9Y689 179 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 RANBP2P49792 3224 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF638Q14966 1978 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SERTM1A2A2V5 107 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 KLF4O43474 513 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 XPNPEP2O43895 674 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 MFN2O95140 757 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 FGF19O95750 216 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CAPN1P07384 714 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 HNRNPA1P09651 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ITIH1P19827 911 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 FMO3P31513 532 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 KCNC1P48547 511 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 RGS4P49798 205 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ERVK-21P61565 698 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC7A9P82251 487 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CYP4F3Q08477 520 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 MPPE1Q53F39 396 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 C6orf136Q5SQH8 315 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PTRHD1Q6GMV3 140 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 TBPL2Q6SJ96 375 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CHST9Q7L1S5 443 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CYP2U1Q7Z449 544 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ADGRD2Q7Z7M1 963 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CHDHQ8NE62 594 aaPredicted RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PIK3C3Q8NEB9 887 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 OR13C4Q8NGS5 318 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ZFP90Q8TF47 636 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 IMP4Q96G21 291 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF599Q96NL3 588 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 BCL7BQ9BQE9 202 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PBX4Q9BYU1 374 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 DERL2Q9GZP9 239 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 REXO4Q9GZR2 422 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 NECTIN3Q9NQS3 549 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 WWOXQ9NZC7 414 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 GALPQ9UBC7 116 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PNMA8CA0A1B0GUJ8 204 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 C5orf67F2Z3F1 127 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CDC7O00311 574 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 TBX1O43435 398 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SEC22BO75396 215 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 OTCP00480 354 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PGRP06401 933 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CCDC159P0C7I6 412 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 DBTP11182 482 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 AGXTP21549 392 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PRKACGP22612 351 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 HTR1BP28222 390 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 POLR2IP36954 125 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 CSKP41240 450 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 RHOAP61586 193 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 IL18R1Q13478 541 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ACOX1Q15067 660 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 UGT3A2Q3SY77 523 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SPANXN2Q5MJ10 180 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 TMEM236Q5W0B7 351 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms