RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ZNF669Q96BR6 464 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 SRPK1Q96SB4 655 aaKnown RBP16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 APOL2Q9BQE5 337 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 CAPS2Q9BXY5 557 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 SLC7A5P2Q9GIP4 190 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 SYBUQ9NX95 663 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 PSD3Q9NYI0 1048 aa16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 PTRH2Q9Y3E5 179 aaKnown RBP16.96■□□□□ 0.31
TRAPPC3-209ENST00000616395 SLC9B1P1A6NJY1 282 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 JRKO75564 520 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 AGXTP21549 392 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 GRIA1P42261 906 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 KCNK10P57789 538 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 DCDC1P59894 354 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 KBTBD12Q3ZCT8 623 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 MLIPQ5VWP3 458 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZNF385CQ66K41 422 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 DUS1LQ6P1R4 473 aaKnown RBP16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 MRGPRGQ86SM5 289 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 CALML6Q8TD86 181 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 SLC44A1Q8WWI5 657 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 DPH2Q9BQC3 489 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 GPR63Q9BZJ6 419 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZFYVE1Q9HBF4 777 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 BPIFA1Q9NP55 256 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 ATP13A2Q9NQ11 1180 aa16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 IMP3Q9NV31 184 aaKnown RBP16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 CFAP20Q9Y6A4 193 aaKnown RBP16.96■□□□□ 0.3
TRAPPC3-209ENST00000616395 MDC1Q14676 2089 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 DNHD1Q96M86 4753 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 LOC285095A0A1B0GVY8 99 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 FAM159BA6NKW6 160 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 BUD23O43709 281 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 PRICKLE3O43900 615 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 SNRPAP09012 282 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 ATXN8OSP0DMR3 200 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 ADRA1AP35348 466 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 FOLR3P41439 243 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 PREPP48147 710 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZNF169Q14929 603 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 FAM180AQ6UWF9 173 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 FAM83HQ6ZRV2 1179 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 PPP1R32Q7Z5V6 425 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 CDH24Q86UP0 819 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 IGDCC3Q8IVU1 814 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 MRRFQ96E11 262 aaKnown RBP16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 CERS2Q96G23 380 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 CNDP1Q96KN2 507 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 GBP5Q96PP8 586 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 KIFC1Q9BW19 673 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 KCNK9Q9NPC2 374 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 OLAHQ9NV23 265 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 MOCS1Q9NZB8 636 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 TMPRSS11EQ9UL52 423 aa16.95■□□□□ 0.3
TRAPPC3-209ENST00000616395 PCNX1Q96RV3 2341 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 A0A1B0GTL3 188 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZNF749O43361 778 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 CRTAMO95727 393 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 MTHFD1P11586 935 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 HOXB4P17483 251 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 FOXL2P58012 376 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 THOC5Q13769 683 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 SLC1A5Q15758 541 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 ANKRD20A4Q4UJ75 823 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 TNFAIP8L3Q5GJ75 292 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 B3GNTL1Q67FW5 361 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 AMZ2Q86W34 360 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 TMEM151BQ8IW70 566 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 LMNTD2Q8IXW0 634 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 MPP5Q8N3R9 675 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 ZNF808Q8N4W9 903 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 BLOC1S5Q8TDH9 187 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 DYDC1Q8WWB3 177 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 PEX13Q92968 403 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 CCDC120Q96HB5 630 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 IQCGQ9H095 443 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 TRABDQ9H4I3 376 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 MAGEE1Q9HCI5 957 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 SSU72Q9NP77 194 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 NFKBIL1Q9UBC1 381 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 SUCOQ9UBS9 1254 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 SERTAD3Q9UJW9 196 aa16.94■□□□□ 0.3
TRAPPC3-209ENST00000616395 CCDC78A2IDD5 438 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 GPR39O43194 453 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 POLR2CP19387 275 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 CDH3P22223 829 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 SSTR2P30874 369 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 DMPKQ09013 629 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 TMEM115Q12893 351 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 GTF2H3Q13889 308 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 PTPRCAPQ14761 206 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 CYP2A13Q16696 494 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 GRTP1Q5TC63 336 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 IGFL2Q6UWQ7 119 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 MICALCLQ6ZW33 695 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 OR2Y1Q8NGV0 311 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 CPNE1Q99829 537 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 FAM167BQ9BTA0 163 aa16.93■□□□□ 0.3
TRAPPC3-209ENST00000616395 SYTL2Q9HCH5 934 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms