RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 MT-CYBP00156 380 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 CST3P01034 146 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 GLDCP23378 1020 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PDHA2P29803 388 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SNAP47Q5SQN1 464 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SMARCD3Q6STE5 483 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CLEC20AQ6ZU45 233 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 DEFB132Q7Z7B7 95 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CIR1Q86X95 450 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 PDSS2Q86YH6 399 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF420Q8TAQ5 688 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 KLHL6Q8WZ60 621 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 KAT2AQ92830 837 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 TUBA1CQ9BQE3 449 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CDH7Q9ULB5 785 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CDC14AQ9UNH5 594 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SCDO00767 359 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 MID1O15344 667 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 NOBOXO60393 691 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 USP2O75604 605 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 CD36P16671 472 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ALAS2P22557 587 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CSKP41240 450 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF280AP59817 542 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 ADAM17P78536 824 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC25A11Q02978 314 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 SH3PXD2AQ5TCZ1 1133 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PRAMEF17Q5VTA0 474 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 NCBP2-AS2Q69YL0 99 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC9A4Q6AI14 798 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GALNTL5Q7Z4T8 443 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 LDB1Q86U70 411 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 CAMKVQ8NCB2 501 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 STON2Q8WXE9 905 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 WDR26Q9H7D7 661 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CPQQ9Y646 472 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CRYBG1Q9Y4K1 1723 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 OR2AT4A6NND4 320 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 M0QX08 132 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC19A2O60779 497 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 DNAJB5O75953 348 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ADH1BP00325 375 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PRH1P02810 166 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CSNK2A2P19784 350 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 PROZP22891 400 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 F8A1P23610 371 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 HSD11B1P28845 292 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GDF10P55107 478 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PAFAH1B3Q15102 231 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 GDPD4Q6W3E5 623 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZMIZ2Q8NF64 920 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PROKR2Q8NFJ6 384 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 OR4C15Q8NGM1 316 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 LRRC20Q8TCA0 184 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PIWIL1Q96J94 861 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF641Q96N77 438 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 KXD1Q9BQD3 176 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 C11orf84Q9BUA3 381 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 OR2AG1Q9H205 316 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SDHAF3Q9NRP4 125 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 FZD4Q9ULV1 537 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 LRRC42Q9Y546 428 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 EVPLQ92817 2033 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PIGBOS1A0A0B4J2F0 54 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 A0A1W2PRB8 838 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 FAM149AA5PLN7 773 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 DCLK1O15075 740 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CLPXO76031 633 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PET100P0DJ07 73 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ATP1B2P14415 290 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 GHRHRQ02643 423 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC18A2Q05940 514 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ADGRF1Q5T601 910 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PRPF38BQ5VTL8 546 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 DCAF12L1Q5VU92 463 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 FRG2Q64ET8 278 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 VITQ6UXI7 678 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC36A4Q6YBV0 504 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC29A4Q7RTT9 530 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 RELL1Q8IUW5 271 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 TIGD4Q8IY51 512 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC44A3Q8N4M1 653 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PYURFQ96I23 114 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 FRG2BQ96QU4 278 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 FEM1AQ9BSK4 669 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 MOCS1Q9NZB8 636 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 RABL2AQ9UBK7 228 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 TNFRSF10DQ9UBN6 386 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 RABL2BQ9UNT1 228 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF451Q9Y4E5 1061 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 BTBD19C9JJ37 291 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 AGPSO00116 658 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 NUAK1O60285 661 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 BCAS2O75934 225 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 HPRP00739 348 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SPATA31D3P0C874 917 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CSTF2P33240 577 aaKnown RBP eCLIP4.46□□□□□ -1.72e-6■□□□□ 10.4
CHD9-221ENST00000615216 VLDLRP98155 873 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLBPQ14493 270 aaKnown RBP eCLIP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms