RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SLC16A5O15375 505 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 PRAMEF4O60810 478 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 C8AP07357 584 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 PCSK2P16519 638 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 HOXB9P17482 250 aaPredicted RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 MNX1P50219 401 aaPredicted RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 PIGFQ07326 219 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 PRAMEF9Q5VWM5 478 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 ZCCHC8Q6NZY4 707 aaKnown RBP16.73■□□□□ 0.27
NEK3-206ENST00000611833 SYT12Q8IV01 421 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 ELMO1Q92556 727 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 PANX1Q96RD7 426 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 CORO1BQ9BR76 489 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 BBS2Q9BXC9 721 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 ZBP1Q9H171 429 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 TBC1D23Q9NUY8 699 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 FAM8A1Q9UBU6 413 aa16.73■□□□□ 0.27
NEK3-206ENST00000611833 CXorf51AA0A1B0GTR3 108 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 GFYI3L273 518 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 FPGTO14772 594 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 KPNA5O15131 536 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 BCL10O95999 233 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 PRPS1L1P21108 318 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 CCR2P41597 374 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 PLA2G16P53816 162 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 AP1S2P56377 157 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 ISL1P61371 349 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 POLR2LP62875 67 aaKnown RBP16.72■□□□□ 0.27
NEK3-206ENST00000611833 IRF8Q02556 426 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 SLC14A1Q13336 389 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 GTF2H3Q13889 308 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 DUOXA1Q1HG43 343 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 ZNF691Q5VV52 312 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 MSANTD1Q6ZTZ1 278 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 MYLIPQ8WY64 445 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 MAGEB10Q96LZ2 347 aaPredicted RBP16.72■□□□□ 0.27
NEK3-206ENST00000611833 REXO4Q9GZR2 422 aaKnown RBP16.72■□□□□ 0.27
NEK3-206ENST00000611833 CCDC90BQ9GZT6 254 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 AASDHPPTQ9NRN7 309 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 EXD2Q9NVH0 621 aa16.72■□□□□ 0.27
NEK3-206ENST00000611833 TMEFF2Q9UIK5 374 aaPredicted RBP16.72■□□□□ 0.27
NEK3-206ENST00000611833 CFAP99D6REC4 459 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 CLIC1O00299 241 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 BCKDKO14874 412 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 MAGEB3O15480 346 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 JUPP14923 745 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 ARHGDIAP52565 204 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 IL1RL1Q01638 556 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 ZNF829Q3KNS6 432 aaPredicted RBP16.71■□□□□ 0.27
NEK3-206ENST00000611833 SHQ1Q6PI26 577 aaKnown RBP16.71■□□□□ 0.27
NEK3-206ENST00000611833 LILRA6Q6PI73 481 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 ZNF621Q6ZSS3 439 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 GALNT5Q7Z7M9 940 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 SERPINA11Q86U17 422 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 OR7A2PQ8NGA2 310 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 CDC26Q8NHZ8 85 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 BORCS5Q969J3 196 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 DGCR6LQ9BY27 220 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 PSME2Q9UL46 239 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 ATP11BQ9Y2G3 1177 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 MYO1GB0I1T2 1018 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 SLC1A7O00341 560 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 FGF18O76093 207 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 CTSAP10619 480 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 ENGP17813 658 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 IGFBP5P24593 272 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 TRPC1P48995 793 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 PFN3P60673 137 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 WDR5P61964 334 aaKnown RBP16.71■□□□□ 0.27
NEK3-206ENST00000611833 IL5RAQ01344 420 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 CPZQ66K79 652 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 GDPD4Q6W3E5 623 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 ZNF551Q7Z340 670 aaPredicted RBP16.71■□□□□ 0.27
NEK3-206ENST00000611833 ELMOD1Q8N336 334 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 SCAMP4Q969E2 229 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 NODALQ96S42 347 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 TMEM39AQ9NV64 488 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 HCFC1R1Q9NWW0 138 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 VNN3Q9NY84 501 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 BAG5Q9UL15 447 aa16.71■□□□□ 0.27
NEK3-206ENST00000611833 HELZP42694 1942 aaKnown RBP16.7■□□□□ 0.26
NEK3-206ENST00000611833 UPK3BL1B0FP48 263 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 UPK3BL2E5RIL1 263 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 NEDD8-MDP1E9PL57 170 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 SLC16A6O15403 523 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 MITFO75030 526 aaPredicted RBP16.7■□□□□ 0.26
NEK3-206ENST00000611833 EPN2O95208 641 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 HTR1AP08908 422 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 CCL5P13501 91 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 COX7A2P14406 83 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 ACPPP15309 386 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 SRSF11Q05519 484 aaKnown RBP16.7■□□□□ 0.26
NEK3-206ENST00000611833 IL18R1Q13478 541 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 DDX39BQ13838 428 aaKnown RBP16.7■□□□□ 0.26
NEK3-206ENST00000611833 DPY19L1Q2PZI1 675 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 ANKDD1AQ495B1 522 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 XKR6Q5GH73 641 aa16.7■□□□□ 0.26
NEK3-206ENST00000611833 ZC3H12BQ5HYM0 836 aaKnown RBP16.7■□□□□ 0.26
NEK3-206ENST00000611833 GTF2IRD2BQ6EKJ0 949 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms