RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 RREB1Q92766 1687 aa14.28□□□□□ -0.12
VPS36-207ENST00000611132 MITFO75030 526 aaPredicted RBP14.27□□□□□ -0.12
VPS36-207ENST00000611132 TBX18O95935 607 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 GLUD1P00367 558 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 ALDOCP09972 364 aaKnown RBP14.27□□□□□ -0.12
VPS36-207ENST00000611132 PRG2P13727 222 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 NPRL3Q12980 569 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 GNA13Q14344 377 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 GANABQ14697 944 aaKnown RBP14.27□□□□□ -0.12
VPS36-207ENST00000611132 HSF5Q4G112 596 aaPredicted RBP14.27□□□□□ -0.12
VPS36-207ENST00000611132 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.27□□□□□ -0.12
VPS36-207ENST00000611132 TSPYL5Q86VY4 417 aaPredicted RBP14.27□□□□□ -0.12
VPS36-207ENST00000611132 OR8H3Q8N146 312 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 PNPLA1Q8N8W4 532 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 OR52L1Q8NGH7 329 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 ALPK1Q96QP1 1244 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 ASPNQ9BXN1 380 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 SLC32A1Q9H598 525 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 TPT1P8Q9HAU6 139 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 HSPB11Q9Y547 144 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 CSF2P04141 144 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 DUSP4Q13115 394 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 HMBOX1Q6NT76 420 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 PNCKQ6P2M8 343 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 METTL3Q86U44 580 aaKnown RBP14.27□□□□□ -0.12
VPS36-207ENST00000611132 CNTN4Q8IWV2 1026 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 IZUMO1Q8IYV9 350 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 ENTPD4Q9Y227 616 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 ARAP2Q8WZ64 1704 aa14.27□□□□□ -0.12
VPS36-207ENST00000611132 ARHGEF33A8MVX0 844 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 C8GP07360 202 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 MAB21L1Q13394 359 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 SNX29P2Q8IUI4 249 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 MMAAQ8IVH4 418 aaKnown RBP14.27□□□□□ -0.13
VPS36-207ENST00000611132 HS3ST5Q8IZT8 346 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 PCSK9Q8NBP7 692 aaKnown RBP14.27□□□□□ -0.13
VPS36-207ENST00000611132 OR52B6Q8NGF0 335 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 UFD1Q92890 307 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 PYCR2Q96C36 320 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 MAPKAP1Q9BPZ7 522 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 NLE1Q9NVX2 485 aaPredicted RBP14.27□□□□□ -0.13
VPS36-207ENST00000611132 COL22A1Q8NFW1 1626 aaPredicted RBP14.27□□□□□ -0.13
VPS36-207ENST00000611132 A0A096LPI6 279 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 NME6O75414 186 aaPredicted RBP14.27□□□□□ -0.13
VPS36-207ENST00000611132 IQCF3P0C7M6 154 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 CORO1AP31146 461 aaKnown RBP14.27□□□□□ -0.13
VPS36-207ENST00000611132 NSG1P42857 185 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 LGALS3BPQ08380 585 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 NDUFAF6Q330K2 333 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 C10orf62Q5T681 223 aaPredicted RBP14.27□□□□□ -0.13
VPS36-207ENST00000611132 FAM117BQ6P1L5 589 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 CCDC28AQ8IWP9 274 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 OR6Q1Q8NGQ2 317 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 CD300AQ9UGN4 299 aa14.27□□□□□ -0.13
VPS36-207ENST00000611132 WNT9AO14904 365 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 CDRT1O95170 752 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 CCNYL3P0C7X3 344 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 CSTF2P33240 577 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS36-207ENST00000611132 ATP12AP54707 1039 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 SERINC3Q13530 473 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 GPAT3Q53EU6 434 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 SETMARQ53H47 684 aaPredicted RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 PIK3R6Q5UE93 754 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 FRG2Q64ET8 278 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 BHLHB9Q6PI77 547 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 RNF111Q6ZNA4 994 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 TMEM203Q969S6 136 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 MAELQ96JY0 434 aaKnown RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 FRG2BQ96QU4 278 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 TTYH2Q9BSA4 534 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 TBC1D17Q9HA65 648 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 CAPN10Q9HC96 672 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 IFT52Q9Y366 437 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 GPR45Q9Y5Y3 372 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 UBE2QL1A1L167 161 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 TLR4O00206 839 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 DLGAP1O14490 977 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 LCKP06239 509 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 FUT4P22083 530 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 KDELR2P33947 212 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 CASP9P55211 416 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 AP1S1P61966 158 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 GRSF1Q12849 480 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS36-207ENST00000611132 KLHL22Q53GT1 634 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 GPRIN1Q7Z2K8 1008 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 SNX20Q7Z614 316 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 KRTCAP2Q8N6L1 136 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 MROQ9BYG7 248 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 TRIT1Q9H3H1 467 aaKnown RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 VPS29Q9UBQ0 182 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 GTF2IRD1Q9UHL9 959 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 HAS3O00219 553 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 CXCR2P25025 360 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 SHMT2P34897 504 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 PTGS2P35354 604 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 MAGEA12P43365 314 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 EMX1Q04741 257 aaPredicted RBP14.26□□□□□ -0.13
VPS36-207ENST00000611132 SCARB2Q14108 478 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 VMACQ2NL98 169 aa14.26□□□□□ -0.13
VPS36-207ENST00000611132 RFTN2Q52LD8 501 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms