RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 RPA4Q13156 261 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 RUNX3Q13761 415 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 SELPLGQ14242 412 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 SPIN4Q56A73 249 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 PAGE2BQ5JRK9 111 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 ACSM2BQ68CK6 577 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 UNC5DQ6UXZ4 953 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 ADAMTSL4Q6UY14 1074 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 CALHM3Q86XJ0 350 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 TRAPPC5Q8IUR0 188 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 MSRB3Q8IXL7 192 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 CFAP206Q8IYR0 622 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 OR8J2Q8NGG1 315 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 OR2L2Q8NH16 312 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 MED8Q96G25 268 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 APIPQ96GX9 242 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 ZFYVE19Q96K21 471 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 APOLD1Q96LR9 279 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 EFCAB11Q9BUY7 163 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 OR2AG1Q9H205 316 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 SERHLQ9NQF3 203 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 FAM120CQ9NX05 1096 aaKnown RBP11.58□□□□□ -0.56
USP6NL-206ENST00000609853 SLC25A37Q9NYZ2 338 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 CHD9Q3L8U1 2897 aa11.58□□□□□ -0.56
USP6NL-206ENST00000609853 MGAT4DA6NG13 374 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 OTOL1A6NHN0 477 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SAC3D1A6NKF1 404 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 E7EQ34 232 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 CLOCKO15516 846 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 PRSS23O95084 383 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 CD22P20273 847 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 FCARP24071 287 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SH3BGRP55822 239 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 MYBPC1Q00872 1141 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 ABHD18Q0P651 414 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 LAPTM5Q13571 262 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 AAK1Q2M2I8 961 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 KRT80Q6KB66 452 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SYT12Q8IV01 421 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 MICU2Q8IYU8 434 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 OR9A1PQ8NGU1 263 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 OR10A6Q8NH74 314 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SETD7Q8WTS6 366 aaKnown RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 NELL1Q92832 810 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 C11orf24Q96F05 449 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 HIC2Q96JB3 615 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 RNF145Q96MT1 663 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 TSSK3Q96PN8 268 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 CPPED1Q9BRF8 314 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 HAUS8Q9BT25 410 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SGPP1Q9BX95 441 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 MAGIXQ9H6Y5 334 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SGK2Q9HBY8 427 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 OLAHQ9NV23 265 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SIRT5Q9NXA8 310 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 GULP1Q9UBP9 304 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 CDH7Q9ULB5 785 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 OAZ3Q9UMX2 235 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 DYRK1BQ9Y463 629 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 PCDHB14Q9Y5E9 798 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 DNMT3AQ9Y6K1 912 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 ARHGAP10A1A4S6 786 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 GRXCR1A8MXD5 290 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 EVPLLA8MZ36 301 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 GPR89AB7ZAQ6 455 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 FOXE1O00358 373 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 CXCR6O00574 342 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 RFXANKO14593 260 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 ACOX3O15254 700 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 TPST1O60507 370 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 MMP20O60882 483 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 GPR89BP0CG08 455 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SMIM18P0DKX4 95 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 HOXB9P17482 250 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 TACR1P25103 407 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 PDHA2P29803 388 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 OPRD1P41143 372 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 GRIA2P42262 883 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 BDKRB1P46663 353 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 PHC1P78364 1004 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 MESP2Q0VG99 397 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 DUOXA1Q1HG43 343 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 PGS1Q32NB8 556 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 MED27Q6P2C8 311 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 TMEM184AQ6ZMB5 413 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SLCO4C1Q6ZQN7 724 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 GET4Q7L5D6 327 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 SERPINA11Q86U17 422 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 EPHX4Q8IUS5 362 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 MMAAQ8IVH4 418 aaKnown RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 YAF2Q8IY57 180 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 PHC3Q8NDX5 983 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 CLHC1Q8NHS4 586 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 UBE2E3Q969T4 207 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 CXorf40BQ96DE9 158 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 FAM120BQ96EK7 910 aaKnown RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 COX14Q96I36 57 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 REXO5Q96IC2 774 aaKnown RBP11.57□□□□□ -0.56
USP6NL-206ENST00000609853 OR4K3Q96R72 315 aa11.57□□□□□ -0.56
USP6NL-206ENST00000609853 TSC22D3Q99576 134 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms