RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CENPUQ71F23 418 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 CUZD1Q86UP6 607 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 CAND1Q86VP6 1230 aaKnown RBP7.28□□□□□ -1.24
CUX1-219ENST00000606749 CILP2Q8IUL8 1156 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 LRRC8AQ8IWT6 810 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 PARP9Q8IXQ6 854 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 IQCKQ8N0W5 287 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 TRIM58Q8NG06 486 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 TM9SF4Q92544 642 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 INPP5DQ92835 1189 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 DPH7Q9BTV6 452 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 SLC29A3Q9BZD2 475 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 ILKAPQ9H0C8 392 aaPredicted RBP7.28□□□□□ -1.24
CUX1-219ENST00000606749 ZNF304Q9HCX3 659 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 SEMA3GQ9NS98 782 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 SPATA7Q9P0W8 599 aa7.28□□□□□ -1.24
CUX1-219ENST00000606749 PLEKHB1Q9UF11 243 aaPredicted RBP7.28□□□□□ -1.24
CUX1-219ENST00000606749 TSR3Q9UJK0 312 aaKnown RBP7.28□□□□□ -1.24
CUX1-219ENST00000606749 NXT1Q9UKK6 140 aaKnown RBP7.28□□□□□ -1.24
CUX1-219ENST00000606749 COPG1Q9Y678 874 aaKnown RBP7.28□□□□□ -1.24
CUX1-219ENST00000606749 PCM1Q15154 2024 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 IGKV1-8A0A0C4DH67 115 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 FAM237BA0A1B0GVD1 139 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 MAGEB16A2A368 324 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 WIPF3A6NGB9 483 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 SDR42E2A6NKP2 422 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 H0YGG7 62 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 MYO1CO00159 1063 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PSIP1O75475 530 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 DDAH2O95865 285 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 KRT14P02533 472 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 EIF2S1P05198 315 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 ZGLP1P0C6A0 271 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PKMP14618 531 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 PAMP19021 973 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 HSD17B2P37059 387 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 VPS41P49754 854 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 CLCN7P51798 805 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 EMP3P54852 163 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 ARF3P61204 181 aaPredicted RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 OCA2Q04671 838 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PRDX1Q06830 199 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 KLC1Q07866 573 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 Q0VFX4 171 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 ARHGAP19Q14CB8 494 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 NAA25Q14CX7 972 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 HIF1AQ16665 826 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 MUM1Q2TAK8 710 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PRTGQ2VWP7 1150 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 AGAP7PQ5VUJ5 663 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 ANKRD22Q5VYY1 191 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 ATG9BQ674R7 924 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PRMT9Q6P2P2 845 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 CASC4Q6P4E1 433 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 SUSD1Q6UWL2 747 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 CYHR1Q6ZMK1 362 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 RNF44Q7L0R7 432 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 LAPTM4BQ86VI4 370 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 REXO1L1PQ8IX06 675 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 METTL27Q8N6F8 245 aaPredicted RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 MCUQ8NE86 351 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 OR11G2Q8NGC1 345 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 DNAJB14Q8TBM8 379 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 STT3BQ8TCJ2 826 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 SMPDL3AQ92484 453 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 MAGOHBQ96A72 148 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 MIEF2Q96C03 454 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 VPS50Q96JG6 964 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 AGAP4Q96P64 663 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PKP4Q99569 1192 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 SLC30A3Q99726 388 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 ZFYVE21Q9BQ24 234 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PLCD4Q9BRC7 762 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 MESP1Q9BRJ9 268 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 TRIM56Q9BRZ2 755 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 ACAT2Q9BWD1 397 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 LHPPQ9H008 270 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 MRPS30Q9NP92 439 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 INTS10Q9NVR2 710 aaKnown RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 ZNF282Q9UDV7 671 aaPredicted RBP7.27□□□□□ -1.25
CUX1-219ENST00000606749 VPS9D1Q9Y2B5 631 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 NTNG1Q9Y2I2 539 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PCDHGA10Q9Y5H3 936 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 CSAG2Q9Y5P2 127 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 FAM169AQ9Y6X4 670 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 PTPN13Q12923 2485 aa7.27□□□□□ -1.25
CUX1-219ENST00000606749 MDC1Q14676 2089 aaKnown RBP7.26□□□□□ -1.25
CUX1-219ENST00000606749 IGLV3-12A0A075B6K2 115 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 ZCWPW2A0A1B0GU75 182 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 CTAGE9A4FU28 777 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 ANKUB1A6NFN9 424 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 E5RI56 91 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 GFYI3L273 518 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 USP1O94782 785 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 KLHL18O94889 574 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 SLC16A8O95907 504 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 HPP00738 406 aa7.26□□□□□ -1.25
CUX1-219ENST00000606749 CATP04040 527 aaKnown RBP7.26□□□□□ -1.25
CUX1-219ENST00000606749 ERVK-10P10266 1014 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms