RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-231ENST00000600648 SNRNP40Q96DI7 357 aaKnown RBP20.62■□□□□ 0.89
FARP1-231ENST00000600648 DPH7Q9BTV6 452 aa20.62■□□□□ 0.89
FARP1-231ENST00000600648 SLC29A3Q9BZD2 475 aa20.62■□□□□ 0.89
FARP1-231ENST00000600648 ILKAPQ9H0C8 392 aaPredicted RBP20.62■□□□□ 0.89
FARP1-231ENST00000600648 WDR54Q9H977 334 aa20.62■□□□□ 0.89
FARP1-231ENST00000600648 PPP2R2CQ9Y2T4 447 aa20.62■□□□□ 0.89
FARP1-231ENST00000600648 HS3ST3B1Q9Y662 390 aa20.62■□□□□ 0.89
FARP1-231ENST00000600648 NBPF19A0A087WUL8 3843 aa20.62■□□□□ 0.89
FARP1-231ENST00000600648 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.61■□□□□ 0.89
FARP1-231ENST00000600648 CTAGE9A4FU28 777 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 SOCS6O14544 535 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 SRPX2O60687 465 aaPredicted RBP20.61■□□□□ 0.89
FARP1-231ENST00000600648 ONECUT2O95948 504 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 CMPK1P30085 196 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 AIMP2Q13155 320 aaKnown RBP20.61■□□□□ 0.89
FARP1-231ENST00000600648 DHX34Q14147 1143 aaKnown RBP20.61■□□□□ 0.89
FARP1-231ENST00000600648 RBBP7Q16576 425 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 ANKRD20A4Q4UJ75 823 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 ZNF470Q6ECI4 717 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 KIRREL2Q6UWL6 708 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 PARP9Q8IXQ6 854 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 ZADH2Q8N4Q0 377 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 PRR7Q8TB68 274 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 SLC30A3Q99726 388 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 MESP1Q9BRJ9 268 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 ABCF3Q9NUQ8 709 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 ASF1BQ9NVP2 202 aa20.61■□□□□ 0.89
FARP1-231ENST00000600648 ICE1Q9Y2F5 2266 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 KLHL41O60662 606 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 IPO13O94829 963 aaKnown RBP20.6■□□□□ 0.89
FARP1-231ENST00000600648 RNF224P0DH78 156 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 ERVK-10P10266 1014 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 ATP5DP30049 168 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 RPA3P35244 121 aaPredicted RBP20.6■□□□□ 0.89
FARP1-231ENST00000600648 MAGEA6P43360 314 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 ADARP55265 1226 aaKnown RBP20.6■□□□□ 0.89
FARP1-231ENST00000600648 CUL1Q13616 776 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 THOC5Q13769 683 aaKnown RBP20.6■□□□□ 0.89
FARP1-231ENST00000600648 NR6A1Q15406 480 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 PRAMEF13Q5VWM6 474 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 RNF44Q7L0R7 432 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 DENND6AQ8IWF6 608 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 TM9SF4Q92544 642 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 INPP5DQ92835 1189 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 PKP4Q99569 1192 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 CRB3Q9BUF7 120 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 SLC26A1Q9H2B4 701 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 ZNF304Q9HCX3 659 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 FBXO6Q9NRD1 293 aaPredicted RBP20.6■□□□□ 0.89
FARP1-231ENST00000600648 KLK4Q9Y5K2 254 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 CSAG2Q9Y5P2 127 aa20.6■□□□□ 0.89
FARP1-231ENST00000600648 OR2A25A4D2G3 310 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 USP1O94782 785 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 VARSP26640 1264 aaKnown RBP20.59■□□□□ 0.89
FARP1-231ENST00000600648 GLRBP48167 497 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 SOX8P57073 446 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 CTBP1Q13363 440 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 HIF1AQ16665 826 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 FBXO42Q6P3S6 717 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 IGFL3Q6UXB1 125 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 PPFIBP2Q8ND30 876 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 SMPDL3AQ92484 453 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 CABS1Q96KC9 395 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 ZFYVE21Q9BQ24 234 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 MRPS30Q9NP92 439 aaKnown RBP20.59■□□□□ 0.89
FARP1-231ENST00000600648 FAM114A2Q9NRY5 505 aa20.59■□□□□ 0.89
FARP1-231ENST00000600648 NXT1Q9UKK6 140 aaKnown RBP20.59■□□□□ 0.89
FARP1-231ENST00000600648 FAM237BA0A1B0GVD1 139 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 SDR42E2A6NKP2 422 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 H0YGG7 62 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 MYO1CO00159 1063 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 FFAR3O14843 346 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 GPR42O15529 346 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 PSIP1O75475 530 aaKnown RBP20.58■□□□□ 0.89
FARP1-231ENST00000600648 SYF2O95926 243 aaKnown RBP20.58■□□□□ 0.89
FARP1-231ENST00000600648 CATP04040 527 aaKnown RBP20.58■□□□□ 0.89
FARP1-231ENST00000600648 ERGP11308 486 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 CLCN7P51798 805 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 PNLIPRP1P54315 467 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 ARF3P61204 181 aaPredicted RBP20.58■□□□□ 0.89
FARP1-231ENST00000600648 TUBB8Q3ZCM7 444 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 IRAK1BP1Q5VVH5 260 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 CUZD1Q86UP6 607 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 REXO1L1PQ8IX06 675 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 GIMAP7Q8NHV1 300 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 STT3BQ8TCJ2 826 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 SSC4DQ8WTU2 575 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 NACC2Q96BF6 587 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 C10orf90Q96M02 699 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 SERPINB12Q96P63 405 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 YIPF2Q9BWQ6 316 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 SYNPO2LQ9H987 977 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 ENAMQ9NRM1 1142 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 SEMA3GQ9NS98 782 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 INTS10Q9NVR2 710 aaKnown RBP20.58■□□□□ 0.89
FARP1-231ENST00000600648 TAC3Q9UHF0 121 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 VPS9D1Q9Y2B5 631 aa20.58■□□□□ 0.89
FARP1-231ENST00000600648 VSTM2BA6NLU5 285 aa20.57■□□□□ 0.88
FARP1-231ENST00000600648 KIF5CO60282 957 aa20.57■□□□□ 0.88
FARP1-231ENST00000600648 FBLP22087 321 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms