RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 DCAF12Q5T6F0 453 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 SUSD1Q6UWL2 747 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 CEACAM20Q6UY09 585 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 C17orf64Q86WR6 236 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 SPNS2Q8IVW8 549 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 C2orf73Q8N5S3 287 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 UBTD2Q8WUN7 234 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 PGM2Q96G03 612 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 MED8Q96G25 268 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 NRTNQ99748 197 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 ATG10Q9H0Y0 220 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 TMEM184CQ9NVA4 438 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 GPRC5BQ9NZH0 403 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 GRID1Q9ULK0 1009 aa15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 COL27A1Q8IZC6 1860 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-219ENST00000599575 MED19A0JLT2 244 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 EFCAB7A8K855 629 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 MAP2K7O14733 419 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 POLR1CO15160 346 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 RGS16O15492 202 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 SMIM24O75264 130 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 TOP3BO95985 862 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 FGF3P11487 239 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 FGF5P12034 268 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 MTHFD2P13995 350 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 H2AFXP16104 143 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 KRT4P19013 534 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 GNAZP19086 355 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 TAC1P20366 129 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 MAGP20916 626 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 GLRBP48167 497 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 KCNC1P48547 511 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 PIK3CGP48736 1102 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 SLC18A2Q05940 514 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 CCDC153Q494R4 210 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 FIGLAQ6QHK4 219 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 MBOAT1Q6ZNC8 495 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 LRRC70Q7Z2Q7 622 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 TRABD2AQ86V40 505 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 TAX1BP1Q86VP1 789 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 FAM129CQ86XR2 697 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 CYP4X1Q8N118 509 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 PLD6Q8N2A8 252 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 PPFIBP2Q8ND30 876 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 ABHD11Q8NFV4 315 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 ZNF578Q96N58 590 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 ZIM3Q96PE6 472 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 UNKQ9C0B0 810 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 THSD1Q9NS62 852 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 FGF21Q9NSA1 209 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 WWOXQ9NZC7 414 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 ACSL6Q9UKU0 697 aa15.93■□□□□ 0.14
SHKBP1-219ENST00000599575 A0A1W2PPM1 405 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 OR2A25A4D2G3 310 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 GOLGA6L10A6NI86 522 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 SUPT3HB4E1H0 165 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 STX16-NPEPL1H3BU86 382 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 COPEO14579 308 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 STX16O14662 325 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 SRPX2O60687 465 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 SUPT3HO75486 399 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 MYZAPP0CAP1 466 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 GFAPP14136 432 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 EZRP15311 586 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 GRK3P35626 688 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 TUBB3Q13509 450 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 TSTA3Q13630 321 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 CASP8Q14790 479 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 ZXDCQ2QGD7 858 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 CEP85LQ5SZL2 805 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 KIAA1614Q5VZ46 1190 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 ZNF425Q6IV72 752 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 THOC6Q86W42 341 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 PPP1R3BQ86XI6 285 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 TBC1D19Q8N5T2 526 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 CCDC126Q96EE4 140 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 THAP11Q96EK4 314 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 PRR11Q96HE9 360 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 SCYL1Q96KG9 808 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 RUFY1Q96T51 708 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 PLCD4Q9BRC7 762 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 DPH7Q9BTV6 452 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 ACAT2Q9BWD1 397 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 CD244Q9BZW8 370 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 PITHD1Q9GZP4 211 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 EHD1Q9H4M9 534 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 VIPAS39Q9H9C1 493 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 OCIAD1Q9NX40 245 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 SLC39A1Q9NY26 324 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 XPR1Q9UBH6 696 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 PISDQ9UG56 409 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 MID2Q9UJV3 735 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 SERTAD3Q9UJW9 196 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 RARRES3Q9UL19 164 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 PLCL2Q9UPR0 1127 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 DYRK1BQ9Y463 629 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 ACTL7BQ9Y614 415 aa15.92■□□□□ 0.14
SHKBP1-219ENST00000599575 A0A1W2PNU3 283 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-219ENST00000599575 NCF1BA6NI72 391 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms