RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NDC1Q9BTX1 674 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 SLC6A20Q9NP91 592 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 DHCR7Q9UBM7 475 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 TRMT6Q9UJA5 497 aaKnown RBP12.51□□□□□ -0.41
USE1-207ENST00000596136 SNX7Q9UNH6 387 aa12.51□□□□□ -0.41
USE1-207ENST00000596136 IGKV1-8A0A0C4DH67 115 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 C9J4A7 227 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
USE1-207ENST00000596136 SLC16A5O15375 505 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 C8GP07360 202 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 PLA2G2AP14555 144 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 ITGAXP20702 1163 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 FDXRP22570 491 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 IMPA1P29218 277 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 RGS4P49798 205 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 ABATP80404 500 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 NFKB2Q00653 900 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 MGAT5Q09328 741 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 NFATC3Q12968 1075 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 SP140Q13342 867 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 GRM7Q14831 915 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 FASTKD3Q14CZ7 662 aaKnown RBP12.5□□□□□ -0.41
USE1-207ENST00000596136 NKAIN1Q4KMZ8 207 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 ICE2Q659A1 982 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 SUSD1Q6UWL2 747 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 UBE2R2Q712K3 238 aaPredicted RBP12.5□□□□□ -0.41
USE1-207ENST00000596136 CYS1Q717R9 158 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 PAQR7Q86WK9 346 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 ANKMY2Q8IV38 441 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 FBXO36Q8NEA4 188 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 ABHD17AQ96GS6 310 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 PDLIM5Q96HC4 596 aaKnown RBP12.5□□□□□ -0.41
USE1-207ENST00000596136 SELENOSQ9BQE4 189 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 DPH7Q9BTV6 452 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 PARVBQ9HBI1 364 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 MRPS30Q9NP92 439 aaKnown RBP12.5□□□□□ -0.41
USE1-207ENST00000596136 PPANQ9NQ55 473 aaKnown RBP12.5□□□□□ -0.41
USE1-207ENST00000596136 TXLNGQ9NUQ3 528 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 GRHL1Q9NZI5 618 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 SLC17A6Q9P2U8 582 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 MAN2B2Q9Y2E5 1009 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 VWA7Q9Y334 891 aa12.5□□□□□ -0.41
USE1-207ENST00000596136 A0A1B0GX78 115 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 DSCR3O14972 297 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 SUV39H1O43463 412 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 NRP2O60462 931 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 CNOT3O75175 753 aaKnown RBP12.49□□□□□ -0.41
USE1-207ENST00000596136 RFPL1O75677 317 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 CCNDBP1O95273 360 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 ALBP02768 609 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
USE1-207ENST00000596136 EMP3P54852 163 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 MRPS25P82663 173 aaKnown RBP12.49□□□□□ -0.41
USE1-207ENST00000596136 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
USE1-207ENST00000596136 CALCOCO2Q13137 446 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 SSPNQ14714 243 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 PRTGQ2VWP7 1150 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 FAM214AQ32MH5 1076 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 HECTD2Q5U5R9 776 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 C1orf189Q5VU69 101 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 FRMPD2BQ6IN97 320 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 FAM45BPQ6NSW5 357 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 TCTN3Q6NUS6 607 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 SLC26A11Q86WA9 606 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 OR2Y1Q8NGV0 311 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 C9orf43Q8TAL5 461 aaPredicted RBP12.49□□□□□ -0.41
USE1-207ENST00000596136 FAM45AQ8TCE6 357 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 MCOLN3Q8TDD5 553 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 CCDC138Q96M89 665 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 ZFYVE21Q9BQ24 234 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 ACAT2Q9BWD1 397 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 PHACTR1Q9C0D0 580 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 SLC26A1Q9H2B4 701 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 MLXIPLQ9NP71 852 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 CUTCQ9NTM9 273 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 TLK1Q9UKI8 766 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 ADAMTS6Q9UKP5 1117 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 PDE10AQ9Y233 779 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 PADI2Q9Y2J8 665 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 PSAT1Q9Y617 370 aa12.49□□□□□ -0.41
USE1-207ENST00000596136 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 MKRN2OSH3BPM6 223 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 CEACAM4O75871 244 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 HRH2P25021 359 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
USE1-207ENST00000596136 IL2P60568 153 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 C2orf54Q08AI8 447 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 FAM69BQ5VUD6 431 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 MLIPQ5VWP3 458 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 TTLL10Q6ZVT0 673 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 OVCH1Q7RTY7 1134 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 ZC3HC1Q86WB0 502 aaKnown RBP12.48□□□□□ -0.41
USE1-207ENST00000596136 ZBED8Q8IZ13 594 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 MYO1HQ8N1T3 1032 aa12.48□□□□□ -0.41
USE1-207ENST00000596136 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms