RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 AHSGP02765 367 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 AGXTP21549 392 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 HSD17B2P37059 387 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 SKIV2L2P42285 1042 aaKnown RBP14.49□□□□□ -0.09
TRIM28-205ENST00000595028 PNLIPRP1P54315 467 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 TLE1Q04724 770 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 ZC3H12BQ5HYM0 836 aaKnown RBP14.49□□□□□ -0.09
TRIM28-205ENST00000595028 C1orf189Q5VU69 101 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 CYHR1Q6ZMK1 362 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 RNF44Q7L0R7 432 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 MAATS1Q7Z4T9 603 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 ANKMY2Q8IV38 441 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 MCATQ8IVS2 390 aaKnown RBP14.49□□□□□ -0.09
TRIM28-205ENST00000595028 FBXO36Q8NEA4 188 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 ZNF480Q8WV37 535 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 ZUFSPQ96AP4 578 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 ZNF285Q96NJ3 590 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 C17orf62Q9BQA9 187 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 ERP44Q9BS26 406 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 NDC1Q9BTX1 674 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 SLC25A18Q9H1K4 315 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 DPH5Q9H2P9 285 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 ENAMQ9NRM1 1142 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 TXLNGQ9NUQ3 528 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 WHRNQ9P202 907 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 DHCR7Q9UBM7 475 aaKnown RBP14.49□□□□□ -0.09
TRIM28-205ENST00000595028 TCFL5Q9UL49 500 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 CORO1CQ9ULV4 474 aaPredicted RBP14.49□□□□□ -0.09
TRIM28-205ENST00000595028 MAN2B2Q9Y2E5 1009 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 KCNMB2Q9Y691 235 aa14.49□□□□□ -0.09
TRIM28-205ENST00000595028 MDC1Q14676 2089 aaKnown RBP14.49□□□□□ -0.09
TRIM28-205ENST00000595028 CCDC88CQ9P219 2028 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 OR2A25A4D2G3 310 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 E7ENX8 843 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 ZBTB14O43829 449 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 NRP2O60462 931 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 SYF2O95926 243 aaKnown RBP14.48□□□□□ -0.09
TRIM28-205ENST00000595028 CMPK1P30085 196 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 RPA3P35244 121 aaPredicted RBP14.48□□□□□ -0.09
TRIM28-205ENST00000595028 RGS4P49798 205 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 PMS2P54278 862 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 CDKN2DP55273 166 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 TAP2Q03519 686 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 CALCOCO2Q13137 446 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 CBLBQ13191 982 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 SP140Q13342 867 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 C4orf17Q53FE4 359 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 TCTE1Q5JU00 501 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 SUSD1Q6UWL2 747 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 UBE2R2Q712K3 238 aaPredicted RBP14.48□□□□□ -0.09
TRIM28-205ENST00000595028 ZBED8Q8IZ13 594 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 C9orf43Q8TAL5 461 aaPredicted RBP14.48□□□□□ -0.09
TRIM28-205ENST00000595028 ADAMTS17Q8TE56 1095 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 DLG3Q92796 817 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 SELENOSQ9BQE4 189 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 DHRS4Q9BTZ2 278 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 ACAT2Q9BWD1 397 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 SLC6A20Q9NP91 592 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 ZFATQ9P243 1243 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 TAC3Q9UHF0 121 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 PADI2Q9Y2J8 665 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 MED13Q9UHV7 2174 aa14.48□□□□□ -0.09
TRIM28-205ENST00000595028 RFPL1O75677 317 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 CCNDBP1O95273 360 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 C8GP07360 202 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 FDXRP22570 491 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 IMPA1P29218 277 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 YBX1P67809 324 aaKnown RBP14.47□□□□□ -0.09
TRIM28-205ENST00000595028 MGAT5Q09328 741 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 TSTA3Q13630 321 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-205ENST00000595028 GRM7Q14831 915 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 HECTD2Q5U5R9 776 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 FAM69BQ5VUD6 431 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 YOD1Q5VVQ6 348 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-205ENST00000595028 ICE2Q659A1 982 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 PAQR3Q6TCH7 311 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 ZNF572Q7Z3I7 529 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-205ENST00000595028 LRRC56Q8IYG6 542 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-205ENST00000595028 MYO1HQ8N1T3 1032 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 GPATCH11Q8N954 259 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 PPFIBP2Q8ND30 876 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 EEF1AKMT1Q8WVE0 214 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 THAP4Q8WY91 577 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 LINGO1Q96FE5 620 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 DPH7Q9BTV6 452 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 MRPS30Q9NP92 439 aaKnown RBP14.47□□□□□ -0.09
TRIM28-205ENST00000595028 GRHL1Q9NZI5 618 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 ADAMTS6Q9UKP5 1117 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 PSAT1Q9Y617 370 aa14.47□□□□□ -0.09
TRIM28-205ENST00000595028 SPTBN1Q01082 2364 aaKnown RBP14.46□□□□□ -0.09
TRIM28-205ENST00000595028 IGKV1-8A0A0C4DH67 115 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 A0A0J9YVX5 310 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 A0A1B0GX78 115 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 FITM1A5D6W6 292 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 TSPAN12O95859 305 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 ARSFP54793 590 aa14.46□□□□□ -0.09
TRIM28-205ENST00000595028 VSX2P58304 361 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-205ENST00000595028 DCDP81605 110 aaKnown RBP14.46□□□□□ -0.09
TRIM28-205ENST00000595028 PDAP1Q13442 181 aaKnown RBP14.46□□□□□ -0.09
TRIM28-205ENST00000595028 SLC9A5Q14940 896 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms