RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 NOXRED1Q6NXP6 359 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 FBXO15Q8NCQ5 510 aaPredicted RBP19.09■□□□□ 0.65
CLIP3-206ENST00000593074 ITCHQ96J02 903 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 RNF145Q96MT1 663 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 FOPNLQ96NB1 174 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 PKP4Q99569 1192 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 SLC28A3Q9HAS3 691 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 DYRK4Q9NR20 520 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 SPATA6Q9NWH7 488 aaPredicted RBP19.09■□□□□ 0.65
CLIP3-206ENST00000593074 V9GYQ6 96 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 K7ESM1 405 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 GMNNO75496 209 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 RAP2AP10114 183 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 C6P13671 934 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 PBLDP30039 288 aaPredicted RBP19.09■□□□□ 0.65
CLIP3-206ENST00000593074 HNF4AP41235 474 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 DOC2AQ14183 400 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 SATL1Q86VE3 508 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 MED8Q96G25 268 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 PNPLA3Q9NST1 481 aa19.09■□□□□ 0.65
CLIP3-206ENST00000593074 DENND4AQ7Z401 1863 aa19.08■□□□□ 0.65
CLIP3-206ENST00000593074 RNF103-CHMP3A0A140T963 221 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 MYOCOSA0A1B0GUC4 107 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 ELOVL7A1L3X0 281 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 FAM220BPB1ANY3 271 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 H3BM21 787 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 RFXAPO00287 272 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 PRSS23O95084 383 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 MT-ND1P03886 318 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 HSD3B1P14060 373 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 HSD3B2P26439 372 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 GJA4P35212 333 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 DPTQ07507 201 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 MTAPQ13126 283 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 E2F2Q14209 437 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 MAP7Q14244 749 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 DPY19L1Q2PZI1 675 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 FAM98BQ52LJ0 330 aaKnown RBP19.08■□□□□ 0.64
CLIP3-206ENST00000593074 SYCE2Q6PIF2 218 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 TMEM184AQ6ZMB5 413 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 DSG4Q86SJ6 1040 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 CALHM3Q86XJ0 350 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 RNF175Q8N4F7 328 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 METTL2AQ96IZ6 378 aaKnown RBP19.08■□□□□ 0.64
CLIP3-206ENST00000593074 EGLN2Q96KS0 407 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 ADI1Q9BV57 179 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 OLAHQ9NV23 265 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 NDUFA13Q9P0J0 144 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 VPS29Q9UBQ0 182 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 INVSQ9Y283 1065 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 CROCCQ5TZA2 2017 aa19.08■□□□□ 0.64
CLIP3-206ENST00000593074 PLOD2O00469 737 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 EI24O14681 340 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 CLGNO14967 610 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 PRMT3O60678 531 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 RAB30Q15771 203 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 KRT80Q6KB66 452 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 XKR5Q6UX68 686 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 TRIM74Q86UV6 250 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 MICU2Q8IYU8 434 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 TMEM132CQ8N3T6 1108 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 FIG4Q92562 907 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 MRPL38Q96DV4 380 aaKnown RBP19.07■□□□□ 0.64
CLIP3-206ENST00000593074 C11orf24Q96F05 449 aaPredicted RBP19.07■□□□□ 0.64
CLIP3-206ENST00000593074 BDH2Q9BUT1 245 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 PLA2G2FQ9BZM2 168 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 BRF2Q9HAW0 419 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 PLK4O00444 970 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 GSTA4O15217 222 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 CLOCKO15516 846 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 LINC01565O15544 149 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 LZTS3O60299 673 aaPredicted RBP19.07■□□□□ 0.64
CLIP3-206ENST00000593074 H6PDO95479 791 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 C1orf105O95561 183 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 PRPS1L1P21108 318 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 GZMMP51124 257 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 C21orf58P58505 322 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 MERTKQ12866 999 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 TMEM52BQ4KMG9 183 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 RAET1GQ6H3X3 334 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 ANKRD54Q6NXT1 300 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 ERN2Q76MJ5 926 aaKnown RBP19.07■□□□□ 0.64
CLIP3-206ENST00000593074 MMAAQ8IVH4 418 aaKnown RBP19.07■□□□□ 0.64
CLIP3-206ENST00000593074 INPP5KQ9BT40 448 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 OR2AG1Q9H205 316 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 GPRC5BQ9NZH0 403 aa19.07■□□□□ 0.64
CLIP3-206ENST00000593074 THAP10Q9P2Z0 257 aaPredicted RBP19.07■□□□□ 0.64
CLIP3-206ENST00000593074 EME2A4GXA9 379 aaPredicted RBP19.06■□□□□ 0.64
CLIP3-206ENST00000593074 C1QTNF3-AMACRE9PGA6 284 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 MMP20O60882 483 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 SCELO95171 688 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 FESP07332 822 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 MYF6P23409 242 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 IL12RB1P42701 662 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 CCR3P51677 355 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 CNPY1Q3B7I2 92 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 SLC36A3Q495N2 470 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 GPR180Q86V85 440 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 TRAPPC5Q8IUR0 188 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 LINC00615Q96LM1 132 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms